Gene Information

Name : aatC (ROD_03481)
Accession : YP_003363986.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 377111 - 377740 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAATTTATATATTCATAAAAAGAAATTCAGAGATAAAACCATTCTTATTGATACTTCTCTGAAAATTATGGAGGG
TGGTTTTTATATTATAACCGGTCCATCTGGTGTTGGTAAAAGTTCTTTGTTAAATATTATTGGGTTATTGGATGGGGATT
TTTATGGTGATTATATGTTTTATGATGAAAAGATATATTTTTATGATTGCAATAAAACGCAAGAATTGAGAAGGTCATAT
TTTGGATATATTTTCCAGGATTCATTGATTAATGAAAGACAAGATCTTATTCGTAACATTCTTTGTTCTGTTGAATATTC
TAAGCAAAAAGAGAAGAAAAAAACTGTAGATCATTTCTTATCCATGGTTGGGTTGCATTTTAAAAACGGATGCTCATCCG
TTTTATCTGGCGGGGAGAAACAAAGGCTCGCTCTTGCCCGGGCTCTAATAAAACAGCCAAAAATACTACTCGCAGATGAA
CCAACAGCAAGCCTTGATAAGGAAAACAAAAAAATAATTATGAGTATTTTAAATTCCTTCAACAACGAAGGGGGGACCAT
AATTATGGTAACACATGATTTGGAACTAATAAATAATAATATGGAAGTTATAACGCTTAGTAATTGTTAA

Protein sequence : 
MINLYIHKKKFRDKTILIDTSLKIMEGGFYIITGPSGVGKSSLLNIIGLLDGDFYGDYMFYDEKIYFYDCNKTQELRRSY
FGYIFQDSLINERQDLIRNILCSVEYSKQKEKKKTVDHFLSMVGLHFKNGCSSVLSGGEKQRLALARALIKQPKILLADE
PTASLDKENKKIIMSILNSFNNEGGTIIMVTHDLELINNNMEVITLSNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aatC YP_003363986.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aatC YP_003363986.1 ABC transporter ATP-binding protein VFG0869 Protein 2e-47 59