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Name : ROD_34991 (ROD_34991) Accession : YP_003366957.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : fimbrial chaperone protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3696144 - 3696887 bp Length : 744 bp Strand : + Note : - DNA sequence : ATGAGCAAGAAAAGACATAACGGATATCTGCTGGCGGCGCTGGCGCTGGGTGCGATTGGCGGCTATGCGCAGGCGGGCGT TTCCCTGGATCGGACCCGCGTCATTATTACGGAGAAAGAGGCGTCGTCGAGCGCCAATCTGACCAATACCAGCCCGGATA TTCCGTTCCTCGCCCAGTCGTGGGTGGAAGACGAGAACGGCAACAAGATCACCTCGCCGCTGCTTGTGCTGCCGCCGCTC CAGCGGATCAACGGCGGGCAGAAAGGGATCGCGCGCGTCACCAAAACGGCCGGTATCGAAAAGCTGCCGAAGGACAGGGA GAGCCTGTTCTATCTCAACGTCAGGGAGATCCCGCCAAAGCCGGATAAACCGAACACCTTACAGTTGGCGATGCAGTCGC GCATCAAGCTGTTTTACCGCCCGGCGGCGGTGATCCCGAAAACAAAAAGCGAAATCTGGCAGGACCAGGTGGTGTTTCAC AAGAACGGCAGCCAGATGACGGCGGAGAACCCGACGCCTTACTACATCACTATCCTCGGCCTGTCGAAAGGCGCCGGACA GAAGATCACCCGCTTTCCGGGGATCATGATCGCGCCAAAATCGAGCAAGCAGTTTGCGGTGACGGACTCCGGCGTGAATC AGTTTTCGATGATGTATGTGAACGACTACGGCGGTCATCCGGAGCTGAAATTTCGCTGCGATGGCAACACCTGTAAAGCG TTGCCGCCCGCTCAGCAGGGCTAA Protein sequence : MSKKRHNGYLLAALALGAIGGYAQAGVSLDRTRVIITEKEASSSANLTNTSPDIPFLAQSWVEDENGNKITSPLLVLPPL QRINGGQKGIARVTKTAGIEKLPKDRESLFYLNVREIPPKPDKPNTLQLAMQSRIKLFYRPAAVIPKTKSEIWQDQVVFH KNGSQMTAENPTPYYITILGLSKGAGQKITRFPGIMIAPKSSKQFAVTDSGVNQFSMMYVNDYGGHPELKFRCDGNTCKA LPPAQQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 1e-49 | 47 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-48 | 46 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 1e-48 | 46 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-48 | 46 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 1e-44 | 45 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-48 | 45 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-48 | 45 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-48 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_34991 | YP_003366957.1 | fimbrial chaperone protein | VFG1547 | Protein | 6e-49 | 46 |
| ROD_34991 | YP_003366957.1 | fimbrial chaperone protein | VFG0885 | Protein | 6e-45 | 45 |
| ROD_34991 | YP_003366957.1 | fimbrial chaperone protein | VFG0896 | Protein | 1e-48 | 45 |
