|
Name : actP (ROD_34551) Accession : YP_003366915.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Resistance Product : cation/acetate symporter Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 3645325 - 3646974 bp Length : 1650 bp Strand : - Note : - DNA sequence : ATGAAGAGAGTCCTGACGGCGCTTGCCGCCACACTACCCTTCGCGGCCAACGCGGCGGATGCCCTTAGCGGTGCCGTACA GCGCCAGCCGACGAACTGGCAGGCCATTATTATGTTCCTGATTTTTGTCGTGTTTACGCTCGGAATTACCTACTGGGCCT CTAAACGCGTTCGTTCACGCAGCGACTACTACACGGCGGGCGGCAATATCACCGGCTTCCAGAACGGGCTGGCGATTGCG GGCGATTATATGTCTGCCGCCTCCTTCCTCGGCATTTCCGCGCTGGTGTTCACATCCGGCTATGACGGGCTGATCTACTC ACTGGGCTTCCTGGTCGGCTGGCCAATCATTCTGTTTTTGATCGCTGAACGTCTGCGTAACCTCGGCCGCTATACCTTTG CCGACGTGGCCTCTTACCGCCTCAGGCAAGGGCCGATCCGTATTCTCTCCGCCTGCGGTTCGCTGGTGGTGGTGGCGCTG TACCTGATCGCCCAGATGGTCGGCGCGGGCAAGCTGATCGAGCTGCTGTTCGGTCTGAACTATCACATCGCGGTGGTGCT GGTGGGCGTGCTGATGATGATGTACGTGCTGTTCGGCGGTATGCTGGCGACCACATGGGTACAGATCATCAAAGCCGTGC TGCTGCTGTTCGGCGCCAGCTTTATGGCCTTTATGGTGATGAAGCACGTCGGCTTCAGCTTCAATAACCTGTTCACTGAA GCGATGGCGGTTCACCCGAAAGGCACCGCGATTATGAGTCCGGGCGGACTGGTGAAAGATCCGATCTCCGCGCTGTCGCT GGGCCTTGGCCTGATGTTCGGCACCGCCGGTCTGCCGCATATTCTGATGCGCTTCTTCACGGTGTCAGACGCGCGCGAAG CGCGGAAAAGCGTGTTCTATGCCACCGGCTTTATGGGTTACTTCTACATTCTGACCTTTATCATCGGCTTTGGCGCCATC ATGCTGGTGGGCGCAAACCCGGCGTACAAAGACGCGGCGGGCGCGCTGATTGGCGGCAACAATATGGCGGCGGTGCATCT GGCTAACGCGGTCGGCGGCAATATGTTCCTCGGCTTTATCTCCGCGGTCGCTTTCGCCACCATTCTGGCGGTAGTCGCCG GGCTGACGCTGGCGGGCGCTTCGGCGGTTTCGCACGATCTGTACGCCAACGTGTTCCGTAAAGGCGCGACCGAGCGTGAC GAATTGCGGGTGTCGAAAATCACCGTGCTGGTGCTGGGCGTGATTGCTATCATTCTCGGCGTGCTGTTTGAAAACCAGAA TATCGCCTTCATGGTCGGCCTGGCGTTTGCTATCGCCGCGAGCTGTAACTTCCCGATCATCCTGCTCTCCATGTACTGGT CGAAGCTGACTACCCGCGGCGCGATGATAGGCGGCTGGTTGGGACTGCTGACGGCGGTAGTATTGATGATCCTCGGCCCG ACCATTTGGGTACAGATCCTCGGTCATGAGAAAGCGATTTTCCCGTATGAATACCCGGCGCTGTTCTCGATCACCGTGGC GTTCCTCGGTATCTGGTTCTTCTCGGCGACCGATAACTCGGCGGAAGGAAACCGCGAACGCGAACAGTTCCGCGCCCAGT TTATCCGCTCCCAGACCGGGTACGGTATCGAACAGGGCCGCGCGCATTAA Protein sequence : MKRVLTALAATLPFAANAADALSGAVQRQPTNWQAIIMFLIFVVFTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIA GDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLRQGPIRILSACGSLVVVAL YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFTE AMAVHPKGTAIMSPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAI MLVGANPAYKDAAGALIGGNNMAAVHLANAVGGNMFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVFRKGATERD ELRVSKITVLVLGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMIGGWLGLLTAVVLMILGP TIWVQILGHEKAIFPYEYPALFSITVAFLGIWFFSATDNSAEGNREREQFRAQFIRSQTGYGIEQGRAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 1e-127 | 58 |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 1e-71 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| actP | YP_003366915.1 | cation/acetate symporter | BAC0564 | Protein | 0.0 | 97 |
| actP | YP_003366915.1 | cation/acetate symporter | BAC0570 | Protein | 8e-141 | 65 |
