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Name : ROD_34461 (ROD_34461) Accession : YP_003366906.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : signal transduction protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG4943 EC number : - Position : 3634498 - 3636084 bp Length : 1587 bp Strand : + Note : - DNA sequence : ATGAATCATCGGGCGCGACGGAAGATGCTGGGGCTCTTTGGGATAATCATGGCGGTGTTGCTCCCCATGATGCTGATGCT TTGGTTTGCCCACTTTCGGGCGGTTTCGCAAACCAGCCAACAATTAGCTACTTTCGCTCAGCTGGCTTTAGATAAAACTG AACAGGTCATTTTACAGGTGGACCTGGCCCGCGATGCCGCCGAGCAGTATCAGGGGCAACCCTGTTCGCCAGCGCATCGC CAGCGAATGTTGAATATTATTCGCGGGCGTTTATATATCAACGAGTTAATTTATGCGCAGGGCGAACGCTTTTTATGCTC GACGGTAATGGCGCCGTCGACGCCTTATATTATGCCGGGCGCGGACTATAAACGAAAACCTGATGTTTCGATTTATTATT TTCGCGATACGCCATTTTTTACTGGTTATAAAATGACGTATATGCAACGTGGAAACTACGTTGCGGTGATTAATCCGCTG TCCTGGAGTGAGGTGATGAGTGAAGATCCCTCGCTGGCCTGGGGAGTGTATGACACGATAACCAACACCTTCTTTTCCGT TAGCGAACAGGCATGGGCGGCTGAGCTTCTGCCGCTGGTGCAGCGCGACAAACCTGTGTTTCAGCAGGGCGGCCGTTTTT ATACCATCGTCCATTCAGATAAACGTCCCATTGCGGTGATTGTGTCGACCTCGATGGAGCGGTTCTACCACAACCTGGTG CAGCAGCTGTTAATTGCCCTGCCGATCGCCATTCTCTGTAGTCTGTTGTTGCTCCTGCTGCGGGCGAGGGCGCGTCGGCA GTACTGTTCGCCGCGAAGAATGCTTCAGCGCGCGCTCAGGCAGCGCCAGCTTAGCGTGTACTACCAGCCAATCATTGATA TCAAAAATGAGAAATGCGTCGGGGCGGAGGCGCTGCTGCGCTGGCCGGGAGGCAACGGACAGGTGATGAGCCCGGCTGAG TTTATCCCGCTGGCGGAAAAAGAGGGGATGATCGCGCAGATTACCGACTATGTCGTGGAAGAGGTTTTTCGCGATATGGG GGATTTTCTGGCCGCGCATCCGCAGCTCTATATCTCTATTAACCTTTCAGCTTCCGATTTCCACTCTTCCCGGCTGATAG CCCTGATTGCGGAAAAAGCGCGTGAGCACCGCGTGCAGGCGCAGCAGATTAAGGTGGAGGTGACCGAGCGGGGCTTTATC GATGTGCCGAAAACCACGCCAGTGATCCAGGCGTTTCGCCAGGCGGGTTACGAAGTGGCGATCGATGATTTCGGCACCGG CTACTCTAACCTGCACAATCTTTACTCGCTGAACGTCGATATTCTCAAAATCGATAAGTCGTTTATCGACACGCTCACCA CCAACAGCACCAGCCCCCTGATTGCGGAGCATATCATTGAGATGGCGCAAAGCCTGCGGCTGAAAACCATCGCGGAAGGG GTGGAAACGGCGGATCAGGTGAGCTGGCTGCTTAAGCGCGGCGTGCAGTATTGCCAGGGCTGGCACTTTGCGAAGGCGCT GCCGCCGCAGGAGTTTATCCACTGGCTACAGCAGCCGCCCGCGCTGCTGACGTCGCGCGGGCAGTAA Protein sequence : MNHRARRKMLGLFGIIMAVLLPMMLMLWFAHFRAVSQTSQQLATFAQLALDKTEQVILQVDLARDAAEQYQGQPCSPAHR QRMLNIIRGRLYINELIYAQGERFLCSTVMAPSTPYIMPGADYKRKPDVSIYYFRDTPFFTGYKMTYMQRGNYVAVINPL SWSEVMSEDPSLAWGVYDTITNTFFSVSEQAWAAELLPLVQRDKPVFQQGGRFYTIVHSDKRPIAVIVSTSMERFYHNLV QQLLIALPIAILCSLLLLLLRARARRQYCSPRRMLQRALRQRQLSVYYQPIIDIKNEKCVGAEALLRWPGGNGQVMSPAE FIPLAEKEGMIAQITDYVVEEVFRDMGDFLAAHPQLYISINLSASDFHSSRLIALIAEKAREHRVQAQQIKVEVTERGFI DVPKTTPVIQAFRQAGYEVAIDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTNSTSPLIAEHIIEMAQSLRLKTIAEG VETADQVSWLLKRGVQYCQGWHFAKALPPQEFIHWLQQPPALLTSRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yjcC | YP_219130.1 | diguanylate cyclase/phosphodiesterase | Not tested | SPI-4 | Protein | 0.0 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_34461 | YP_003366906.1 | signal transduction protein | VFG0584 | Protein | 0.0 | 77 |
