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Name : cts2V (ROD_34231) Accession : YP_003366884.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T6SS protein Cts2V Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3603847 - 3606354 bp Length : 2508 bp Strand : + Note : ClpV component of T6SS DNA sequence : ATGGACTTAAAAGCGCTGGTACAGCGGCTGAACCCGGTTTGTCTGTACGCGCTGGAACAGGCCGCCGGGCGTAGCCGGGC GCAGGGGCACTGGTTTGTGGAGCCGGAACATCTGCTGCTGGCATTGCTGGACGACGAGCACTGCGATCTGGCGTGCTGCC TTGACGGCGCGGGGATTCCTGTCGACGCGCTGCGCGATGAGATCCGGCGCGCCCAGTCGCAGTTCAGAACCGGCTGTACG CGAATGCCGGTCTTTTCTGCGCAGTTGGTGGAGCTGCTGGAGGGGGCGCTGTTACTGACCACTTTCCGTCAGTTGAAGCA GGTGCGCTCCGCGCTGCTGCTGCTGACTCTGCTCACCCGCGATCGCCTGCGCGCCCAGTTGGCGCAGGGGCTACCGCTGC TGTTAAAGATCTCCGCAGAACAACTGGAAGATCATTGGCTGAATTGGTGTCGTGGATCCGCTGAAGCGGTGAGCGATAGA TCGGACGCTGACGCGGCGGTTCGCGGCGACAGCGTGCTGGATCAATACACACACGATCTTACCCGTGAAGCCCGGCAAGG ACGGATCGACCCGATCATCGGGCGTGATGCTGAAATCCGTCAGTGCATTGACATTCTGCTGCGCCGTCGGCAGAACAACC CGATTCTGGTAGGCGCGCCGGGCGTCGGGAAAACCGCCGTCGCCGAAGGGCTGGCGCTGCGTATCGCCGAAGGCAGCGTG CCGCCGCCTCTGCGTGATGTGGCGCTGCTTTCACTCGATCTCGGCCTGTTACAGGCGGGGGCGGGAGTGAAAGGCGAATT TGAGCAGCGCCTGAAAGGGGTGATTGAGGCGGTCAAAAAATCCTCTCAGCCGATCGTCTTGTTTATCGACGAAGCCCATA CGCTGATTGGCGCAGGCGGCGCCGAGGGCGGCAGCGATGCCGCCAACCTGCTGAAGCCAGCGCTGGCGCGTGGCGAGCTG CGAACCATTGCCGCTACCACCTGGCAGGAGTACAAAAAATATTTTGAGAAGGACCCGGCGCTGGATCGCCGTTTTCAGCG CATTCATATTGAAGAGCCGGACGAGGATAGCGCGGTGATGATGCTGCGGGCGGTGGCCGATAAGCTGGAAGCGCACCACG GGGTGCAGATTCTGGATACCGCTATTCGAGAGGCGGTGCGCCTGTCGCAACGCTACATCTCCGGGCGTCAGCTACCGGAT AAGGCTATCAGCGTCCTTGATACCGCCTGTTCGCGGGTGGCGCTGGCGCAGCATGATATCCCTCCGGCGTTGGAGGAGGT TCGCCAGCAGCTGGCTACCATTGAGGAAGAGAGCGTGCGTCTGAATCGCGAGCTGCTGGTGGGCATCGATCATCACGATC GGCTATGCGATCTGGAGGCGCAGGCGAAGCTGTTGCAGCTTCAGGCGCAGGAGGTGGAGGAACGCTGGCAGGATGAACGC CAGCGGGTCGGCGAACTGCTGGCTGCCCGTCAACGGATGCTGGCGCTGAACGCGCGGCTGGACGACGAGGAAGAACTGGA ACAGGAGCTGGTGGAGTGCGCGGCACTGATCGGCAAACTGGAAACCGCCGCCGTCCAACTCCGCGATGAAGTGCCGCTGG TACCAGACTGCGTTGATGCCGCCACCGTTGCAGCAGTGATCGGCGGCTGGACCGGGATACCGATCGGGCAGATGCTTACT GATGAAGCGCACGCGCTGCGTACGCTGGTCGAACGGATGAGCGAGCGGGTGATGGGGCAACGGGCAGCGCTTGAGACTAT CGCCCGGCGGCTGCGCGCCTACCGCAGCGGCCTGACCGATCCGCAAAAGCCGGTTGGCGTATTCCTGCTGGTGGGGCCAA CCGGCGTTGGCAAAACTGAAACCGCCTATGCGCTGGCCGATGCGCTCTACGGCGGCGAACGAAATCTCATCACCATCAAC CTCTCCGAATACCAGGAAGCGCACACCGTCAGCCAGTTAAAAGGCGCGCCGCCGGGTTACGTCGGCTATGGCAGCGGTGG GGCGCTAACTGAAGCCGTGCGCCGCCGTCCTTACTCTGTGGTTCTGCTGGATGAAATCGAAAAGGCGCATCCGGACGTGC TGGAGGCGTTTTATAACGTCTTCGACAAAGGCGTCATGGAGGACGGTACCGGATTAATTGTCGACTTCAAAAACACGGTG ATGCTGGCGACCAGCAACGTCGGGGCGGAGTTAATTCTTGAAACGCCGACTTCTGAATTCAATAGCGAGTGGTTTAATAC GGCGATGCGCGAAGAGTTGTTGCGCCATTTTCGTCCGGCGTTTTTAGCGAGGATGACCACAGTAGCCTATCGCGCGTTGG ATGAAGAAACATTAAAAGGCATTGTGCTGGCGAAACTGGAGAAATTAGCTCAACGGTATCTGGTGGCGACAGGTGAGAAA TTAAATATGGAGGATGGGCTGGTCGAAAGGGTAATGGATCAATGTAAGGGAGTGGGGGCCAGAGATATTGAGAATCTGGT GATTGGGGCAGTAATGGGCGATAAATAA Protein sequence : MDLKALVQRLNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEIRRAQSQFRTGCT RMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDRLRAQLAQGLPLLLKISAEQLEDHWLNWCRGSAEAVSDR SDADAAVRGDSVLDQYTHDLTREARQGRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGSV PPPLRDVALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGAGGAEGGSDAANLLKPALARGEL RTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDSAVMMLRAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPD KAISVLDTACSRVALAQHDIPPALEEVRQQLATIEEESVRLNRELLVGIDHHDRLCDLEAQAKLLQLQAQEVEERWQDER QRVGELLAARQRMLALNARLDDEEELEQELVECAALIGKLETAAVQLRDEVPLVPDCVDAATVAAVIGGWTGIPIGQMLT DEAHALRTLVERMSERVMGQRAALETIARRLRAYRSGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITIN LSEYQEAHTVSQLKGAPPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNTV MLATSNVGAELILETPTSEFNSEWFNTAMREELLRHFRPAFLARMTTVAYRALDEETLKGIVLAKLEKLAQRYLVATGEK LNMEDGLVERVMDQCKGVGARDIENLVIGAVMGDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-129 | 53 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-110 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-110 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cts2V | YP_003366884.1 | T6SS protein Cts2V | VFG2076 | Protein | 6e-152 | 51 |
| cts2V | YP_003366884.1 | T6SS protein Cts2V | VFG2084 | Protein | 6e-116 | 48 |
