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Name : dnaB (ROD_33781) Accession : YP_003366842.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3554734 - 3556089 bp Length : 1356 bp Strand : - Note : - DNA sequence : ATGAGTAAGCGCAAACGGTCACAACCGCCCCACTCTGTCGAAGCGGAACAATCCGTGCTCGGCGGACTGATGCTGGATAA CGATCGCTGGGATGACGTAGCCACGCAGATTTCCGCGCAGGACTTCTTTATATCCACGCACCGCACTATCTATAGCCATA TGCAAACCCTGGTCGAACAAGGAAACCCTATCGACCTGATCACCCTGAGCGAATCGCTGGAACAGCAGGAGCAACTCGAA CAGGTGGGCGGTTTTGCTTATCTGGCGGAGCTTTCCAAAAACACACCCAGCGCCGCCAATATCATTCCCTACGCGCAATA CATTGCCAGCTACGGTGAACTGCGCCAGCTACTGTTATTAGGCAATGAACTGAGCGATATGGCAGGCCAGCCGCGCAGCA ATGTGGCCGATGTGCTGAATTTTGCCGAACAAAAGCTGTTTGCCATTGCGCAGTCGCATCAGGATGGCGGCCTGACCGAC ATCAGCGCCTACTTTGACAACGTGCTGGCTGGCATCGCTCAGCGCTATGAGGCAGAACGCGGTAGCCTCAGCGGCACGCC ATCCGGGCTGGAACAGCTCGACGCCCTGACCTGCGGCTTCCAGCCTGCCGACCTGATTATCGCCGCCGCACGCCCTTCCG TAGGTAAAACCGCTTTCGCCCTGACGCTGTGCGTCAACGCGCTAATGCTCCTCCCCACCCAGCCAGTACAAATCTACAGC ATGGAAATGTCGGCAGAGCAGCTACTGCTGCGGCTGGTTTCTCTGATTGGCCATGTCTCGCAGATCCGGCTACGCAGCGG TGATCTCAGTGATGACGACTGGCAGCAGATTGGCCTCAGCGCCAATATCCTGATGAACGAGTGGAAAGATCGTCTGCTGC TCGACGACTCCGGGATCCTCACCCCATCCCTGCTACGCAGTCGGGCCAGACGATCGCTGCGCCAGTACGGGCTTCCCTCC CTGATCGTGGTTGATTACCTGCAACTGATGCGCAGCGGCGGCGCGGAGAACCGCAATCTGGAGATCTCGACGATCTCCCG CTCGCTAAAAGCGCTGGCGAAGGAATTAAATTGCCCGGTGCTGGCGCTGTCGCAGCTTAACCGGGCGCTGGAGTCACGCC TTAACAAGCGCCCCTGTAATGCCGATCTGCGCGATTCCGGCTCTATCGAGCAGGATGCCGACGTGATCTTATTCCTCTAC CGCGACGAGCTGTATGATCCCAACACGCTGGATCGTGGTATCGCCGAAGTCATTGTCAGCAAACAGCGCAACGGCCCGAT TGGCACGGTGCGCACCCGATTTATCAGCGATCAAACCCGCTTCGAATCGCTCAACCAGCAAGGAGTCGGGTCATGA Protein sequence : MSKRKRSQPPHSVEAEQSVLGGLMLDNDRWDDVATQISAQDFFISTHRTIYSHMQTLVEQGNPIDLITLSESLEQQEQLE QVGGFAYLAELSKNTPSAANIIPYAQYIASYGELRQLLLLGNELSDMAGQPRSNVADVLNFAEQKLFAIAQSHQDGGLTD ISAYFDNVLAGIAQRYEAERGSLSGTPSGLEQLDALTCGFQPADLIIAAARPSVGKTAFALTLCVNALMLLPTQPVQIYS MEMSAEQLLLRLVSLIGHVSQIRLRSGDLSDDDWQQIGLSANILMNEWKDRLLLDDSGILTPSLLRSRARRSLRQYGLPS LIVVDYLQLMRSGGAENRNLEISTISRSLKALAKELNCPVLALSQLNRALESRLNKRPCNADLRDSGSIEQDADVILFLY RDELYDPNTLDRGIAEVIVSKQRNGPIGTVRTRFISDQTRFESLNQQGVGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-87 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-100 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-100 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-99 | 54 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-96 | 52 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-84 | 52 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-84 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-86 | 50 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-74 | 45 |
