Gene Information

Name : traG (ROD_33631)
Accession : YP_003366830.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : conjugative transfer system protein TraG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3543416 - 3544066 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence :
ATGCGCAGATATCTGTTGCTGTGCCTTCTGCTACTGCCGCTGTTTGCCAGCCCACAGCAAACCCGTATTGAAGAACAGAC
CATCACCCACACGCAGGCACAGCAGTGGGGATTAACCGACAGCGAATGGCAGCACTACCAGCAACTGCGTCAGGGCGAGC
GCGGCATCTGGTCGCCGGGGCTCGATCCCCTCACCACCCTCGGCGTGGAAGCCAACAGCGACGCTGAACGCCAGCGCTAT
GCTGAGCTGCTGGCCCGTAAAGAGCATCAGCGGGTGGAGAAAGAGCTGGCGTTCCAGCGTGCCTACGACCAGGCGTGGAA
GCGGCTTTATCCGACGCTGACGCCCATCCGCAGCGTCGTCCAGCCACGAATAGCGCTGTTCGTCAGTGAAAAATGCCCAG
CCTGCGAGACGCTGGCGCAGAAGCTTATCAACGATGACCGCCCGCTGGATATCTGGCTGGTTAACAGCCGTAACGACGAT
GCCAGCCTGCAACGCTGGGCGCAGCGCCAGCATATTGATATGCGCAAAGTCGAGCGCGGGCAGATAACGCTTAATCACGA
TAACGGGCGCTGGCAACGCCTCGGTGGTGGAAAGTTACCGTTATTGCTGGAACAACAGGGGGAGCAATGGCGTCCCGTCT
CTGCACCCTGA

Protein sequence :
MRRYLLLCLLLLPLFASPQQTRIEEQTITHTQAQQWGLTDSEWQHYQQLRQGERGIWSPGLDPLTTLGVEANSDAERQRY
AELLARKEHQRVEKELAFQRAYDQAWKRLYPTLTPIRSVVQPRIALFVSEKCPACETLAQKLINDDRPLDIWLVNSRNDD
ASLQRWAQRQHIDMRKVERGQITLNHDNGRWQRLGGGKLPLLLEQQGEQWRPVSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 6e-38 50
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 3e-39 46
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 1e-36 46
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 1e-39 45
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 1e-39 45
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 8e-38 44
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-38 44
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-37 44
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-36 43
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 2e-31 43
api24 CAF28498.1 conserved hypothetical protein Not tested YAPI Protein 3e-38 43
YpsIP31758_3721 YP_001402675.1 hypothetical protein Not tested YAPI Protein 6e-38 43
Pmu_03220 YP_005176221.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-33 41