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Name : treC (ROD_33101) Accession : YP_003366791.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 3492332 - 3493987 bp Length : 1656 bp Strand : - Note : - DNA sequence : ATGACCACTCTTCCCCACTGGTGGCAAAACGGCGTTATCTACCAGATCTATCCCAGGAGTTTTCAGGATACGACCGGCAG CGGCACCGGCGATCTGCGCGGCGTGACCCTGCGTCTCAACTACCTGCAAAAGCTGGGCGTGGACGCCATCTGGCTGACGC CGTTCTATATCTCGCCGCAGGTCGATAACGGCTACGACGTCGCCAGTTATACCGCTATCGACCCGGCCTACGGCACGCTC GACGACTTCGACGAGCTGGTTGCCCAGGCCAAAGCGCGCGGCATCCGCATTATCCTCGACATGGTGTTTAACCACACCTC CACCCAGCACCCGTGGTTTCACGCGGCGCAGGAGAGAAACAGTCCCTATCGCGCGTTTTATATCTGGCGCGACGGCGAAC CCGACCAGCCGCCGAACAACTGGTGCTCCAAATTTGGCGGCAGCGCCTGGCGCTGGCACGCGCAGAGCGGGCAATATTAT CTGCACCTTTTCGCGCCGGAGCAGGCGGATCTGAACTGGGAGAACCCGGCGGTGCGCGCCGAACTGAAAAAAGTGTGCGA GTTCTGGGCGGATCGCGGCGTGGACGGCCTGCGACTGGACGTCGTGAACCTGATCGCCAAAGATCAGCGCTTTCCTGACG ACCCCGACGGCGATGGCCGCCGTTTTTATACCGACGGCCCCCGCGCCCATGAGTTTCTGCATGAGATGAACCGCGACGTT TTTACGCCGCGCAACCTGATGACCGTCGGCGAGATGTCTTCCACCACCCTGGAACACTGTCAGCGCTACGCGTCGCTTAC CGGCAGCGAACTGTCGATGACCTTTAACTTTCACCATCTGAAGGTCGATTATCCCGGCGGCGAAAAGTGGACGCTGGCAA AGCCCGACTTTTTAGCGCTGAAAGCGTTGTTTCGCCACTGGCAGCAGGGGATGCATAACGTGGCGTGGAACGCGCTGTTC TGGTGTAACCACGACCAGCCGCGCATCGTTTCGCGCTTTGGCGACGAAGGCGAATACCGGGTTCCGGCCGCTAAAATGCT GGCGATGGCGCTGCACGGTATGCAGGGAACGCCGTACATCTACCAGGGCGAGGAGATCGGTATGACCAATCCGCATTTCT CGCAGATTACCGACTACCGTGACGTCGAGAGCCACAATATGTTCGCGGCAATGCGCGCGCAGGGAGGCGATGCGGATACG TTACTCGCCATTCTGGCGAGTAAATCGCGCGATAACGGCCGCACGCCGATGCAGTGGGACAAGAGTGAAAACGCCGGTTT CACCACCGGCGAACCGTGGATAAAACTGTGCGATAACTACCCCGACATCAACGTGGCGGCGGCGCTTGAAGATCCTGACT CGGTGTTTTACACCTACCAGCGGCTCATCGCGCTGCGCAAAGCAGAACCGGTGCTGAGCTGGGGCGACTATCAGGATCTG CTGCCGGACAGCCCGCACCTGTGGTGCTATCGTCGGCAATGGCAGGGGCAGACGCTGCTGGTAGTAGCCAACCTGAGCGG TGAATGCCAGCGCTGGCAGCCAGAGCAAAGCCCGGGAGCGTGGCGGCTGTTAGTGCATAACTACGAGGAGACGTCGCCGC AGCCGACGGCGATGACGCTGCGCCCGTTTGAAGCGATCTGGTGGCTGCGGACGTAA Protein sequence : MTTLPHWWQNGVIYQIYPRSFQDTTGSGTGDLRGVTLRLNYLQKLGVDAIWLTPFYISPQVDNGYDVASYTAIDPAYGTL DDFDELVAQAKARGIRIILDMVFNHTSTQHPWFHAAQERNSPYRAFYIWRDGEPDQPPNNWCSKFGGSAWRWHAQSGQYY LHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQRFPDDPDGDGRRFYTDGPRAHEFLHEMNRDV FTPRNLMTVGEMSSTTLEHCQRYASLTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFLALKALFRHWQQGMHNVAWNALF WCNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFSQITDYRDVESHNMFAAMRAQGGDADT LLAILASKSRDNGRTPMQWDKSENAGFTTGEPWIKLCDNYPDINVAAALEDPDSVFYTYQRLIALRKAEPVLSWGDYQDL LPDSPHLWCYRRQWQGQTLLVVANLSGECQRWQPEQSPGAWRLLVHNYEETSPQPTAMTLRPFEAIWWLRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-119 | 43 |
