Gene Information

Name : nrdE (ROD_31331)
Accession : YP_003366635.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase 2 subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 3301712 - 3303856 bp
Length : 2145 bp
Strand : -
Note : -

DNA sequence :
TTGGCAACGACAACCGCAGAACGCGTAGCGCAGGCAACGCCGGATTATCACGCGCTGAATGCGATGCTCAACCTGTACGA
TAAAGCAGGCCGCATTCAGTTTGAAAAGGACAGAGAGGCGGTGGATGCCTTTTTTGCCGCGCACGTTCGTCCCCACAGCG
TGACGTTCAGCAGCCAGCAGGCGCGTCTTGAAACCCTCGTCCGCGAAGGCTATTACGACGAAAGCGTGCTGAACCGCTAC
CCTCGCGCTTTCGTCATCGATCTGTTCGCCCACGCGCACGCCAGCGGCTTTCGCTTCCAGACCTTCCTCGGCGCCTGGAA
GTTTTACACCAGCTACACGCTGAAAACTTTTGATGGCAAACGCTATCTGGAAGATTTTGAGGACCGGGTGGTAATGGTGG
CGCTGACCCTCGCTCGTGGAGATGAAACGCTGGCGAGACAGTTAACCGATGAGATCCTCGCCGGTCGCTTCCAGCCTGCC
ACGCCTACCTTTTTAAACTGCGGCAAACAGCAGCGCGGCGAACTGGTTTCCTGCTTCCTGCTGCGTATTGAAGACAATAT
GGAGTCGATTGGCCGGGCGGTGAACGCCGCGCTTCAGCTGTCGAAACGCGGCGGCGGCGTGGCGTTTCTGCTCTCTAACC
TGCGGGAAGCGGGCGCGCCGATTAAACGCATCGAAAACCAGTCCTCCGGCGTGATCCCGGTGATGAAAATGCTGGAGGAC
GCCTTTTCCTACGCCAACCAGCTCGGCGCGCGCCAGGGGGCGGGAGCGGTATATCTGCACGCCCATCATCCGGATATTCT
GCGTTTCCTCGATACCAAACGCGAAAATGCCGATGAGAAGATCCGCATTAAAACGCTGTCGCTCGGCGTCGTTATCCCGG
ACGTCACCTTCCGGCTGGCAAAAGAGAATGCGCAGATGGCGCTCTTTTCCCCCTATGACGTGGAGCGGATTTACGGCAAG
CCGTTTGGCGATATTGCGGTCAGCGACCTTTATGATCAACTGGTTGCCGATGCGCGGGTGCGCAAAAAATACATCAACGC
CCGCGACTTCTTCCAGCGGCTGGCGGAAATCCAGTTCGAGTCCGGCTATCCGTACATCATGTTTGAAGATACGGTGAACC
GCGCCAGTCCGGTTGCCGGGCGCATCAATATGAGCAACCTGTGCTCGGAGATTTTGCAGGTCAACAGCGCCTCCACGTAT
GACGATAATCTCGACTACGCGCAGACGGGACACGATATCTCCTGCAACCTCGGCTCGCTGAATATCGCTCATACGATGGA
TTCGCCGGACTTTGGCCGCACCGTGGAAACGGCGATTCGCGGCCTGACGGCGGTGTCCGATATGAGCCATATCCGTAGCG
TTCCCTCCATTGAGGCGGGTAACGCCGCTTCCCATGCAATCGGGCTTGGGCAGATGAACCTGCACGGCTATCTGGCGCGG
GAAGGCATCGCCTACGGATCGCCGGAGGGGCTGGACTTCACCAACCTCTATTTTTACACCATCACCTGGCATGCGCTGAA
CACCTCAATGAAGCTGGCGCGCGAGCGTGGTCAGGCCTTCGCCGGTTTTAAACAGTCGCGCTACGCCAGCGGTGAGTATT
TCAGCCAGTATCTGCAAGGCGACTGGCAGCCGAAAACGGAAAAGGTGCGCGCCCTGTTCGCCCGCAGCGGCATTACGCTC
CCCACGCGGGAAATGTGGCGACAGCTGCGCGATGACGTGATGCGCTACGGCATCTATAACCAGAATTTGCAGGCGGTGCC
GCCAACCGGGTCGATCTCCTATATCAATCATGCGACCTCCAGTATTCATCCGATTGTCTCGAAGGTGGAGATCCGCAAAG
AGGGAAAAACCGGCCGCGTTTATTACCCTGCGCCGTTTATGACCAATGAAAATCTGGACATGTATCAGGATGCGTACGAA
ATCGGTCCGCAAAAAATCATCGACACCTACGCCGAAGCGACGCGCCACGTCGATCAGGGGCTGTCACTGACGCTGTTTTT
CCCGGACACCGCCACCACCCGCGACATCAACCGGGCGCAGATTTACGCCTGGCGCAAGGGGATAAAAACGTTGTACTACA
TCCGGCTGCGCCAGTTAGCGCTGGAAGGTACAGAAATTGAAGGTTGCGTCTCGTGCGCACTGTAA

Protein sequence :
MATTTAERVAQATPDYHALNAMLNLYDKAGRIQFEKDREAVDAFFAAHVRPHSVTFSSQQARLETLVREGYYDESVLNRY
PRAFVIDLFAHAHASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFEDRVVMVALTLARGDETLARQLTDEILAGRFQPA
TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNAALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED
AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDVTFRLAKENAQMALFSPYDVERIYGK
PFGDIAVSDLYDQLVADARVRKKYINARDFFQRLAEIQFESGYPYIMFEDTVNRASPVAGRINMSNLCSEILQVNSASTY
DDNLDYAQTGHDISCNLGSLNIAHTMDSPDFGRTVETAIRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR
EGIAYGSPEGLDFTNLYFYTITWHALNTSMKLARERGQAFAGFKQSRYASGEYFSQYLQGDWQPKTEKVRALFARSGITL
PTREMWRQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVSKVEIRKEGKTGRVYYPAPFMTNENLDMYQDAYE
IGPQKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINRAQIYAWRKGIKTLYYIRLRQLALEGTEIEGCVSCAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 71