Gene Information

Name : escT (ROD_30091)
Accession : YP_003366515.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS structural protein EscT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3176354 - 3177130 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGAAATAATGACTGTCATAGTTTCATCATTCTTTTGCATACTCAGACCGCTGGGGATGTTTATTATTCTTCCAAT
ATTTTCAACAGGCGTTTTGCTGAGTAATTTTATACGTAATTCAATTATGGTTGCGTTTACACTACCAATCATAGTCGAGA
ATTATAAATTTTCAGAAGGATTACCATCTGGAATTTTTCAGTTGATCGCTATCGTGTTAAAAGAAATAAGCATAGGTTTT
TTTATTGGTTTGTCATTTACTATACTTTTTTGGGCTATAGATGCGGCTGGACAAATTATTGATACCCTAAGAGGTTCAAC
AATATCTTCAATTTTTAACCCGTCTATAAGCGATTCATCCTCTATTACTGGCGTTATTTTGTACCAATTTGTCACCGTAA
TATTTGTCATCCATGGAGGAATACAAAGCGTTCTGGATAAGTTATATTTGTCCTACGAGATGTTGCCATTACAATCTGGT
ATAACATTCAATCATACTTTGGTTGATTTTTTATTTTCACTATGGGATTCATTTATTAAACTAATGTTGTCATTTTCAGT
CCCCATGGTTATCGGTATATTCTTATGTGATATGGGATTTGGGTTTCTCAACAAAACCGCTCCTCAGCTAAACGTATTTA
CACTATCGCTACCAGTAAAAAGTTTGATAGCAGTTTTTATATTGTTGTTGGTTATTCACATTTTTCCAGAGTTTATTACA
GCCAATATTCATTCTGACATAATTGACAGAACCTTACCGAGTATGATTAATGAGTGA

Protein sequence : 
MNEIMTVIVSSFFCILRPLGMFIILPIFSTGVLLSNFIRNSIMVAFTLPIIVENYKFSEGLPSGIFQLIAIVLKEISIGF
FIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSSSITGVILYQFVTVIFVIHGGIQSVLDKLYLSYEMLPLQSG
ITFNHTLVDFLFSLWDSFIKLMLSFSVPMVIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAVFILLLVIHIFPEFIT
ANIHSDIIDRTLPSMINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06356.1 EscT Virulence LEE Protein 6e-108 99
escT AAK26702.1 EscT Virulence LEE Protein 7e-104 94
escT AAL57529.1 EscT Virulence LEE Protein 7e-104 94
escT YP_003223488.1 T3SS structure protein EscT Virulence LEE Protein 1e-103 94
escT CAC81849.1 EscT protein Virulence LEE II Protein 7e-104 94
escT YP_003232140.1 T3SS structure protein EscT Virulence LEE Protein 1e-103 94
escT CAI43887.1 EscT protein Virulence LEE Protein 7e-104 94
ECs4581 NP_312608.1 EscT Virulence LEE Protein 6e-103 92
escT AAC31526.1 L0047 Virulence LEE Protein 4e-103 92
escT ACU09471.1 type III secretion apparatus protein SpaR/YscT/HrcT Virulence LEE Protein 4e-103 92
escT YP_003236101.1 putative T3SS structure protein EscT Virulence LEE Protein 6e-103 92
escT AAC38371.1 EscT Virulence LEE Protein 2e-103 92
escT NP_290281.1 hypothetical protein Virulence LEE Protein 6e-103 92
escT AFO66312.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-79 73
escT AFO66402.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-79 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
escT YP_003366515.1 T3SS structural protein EscT VFG0717 Protein 1e-103 92
escT YP_003366515.1 T3SS structural protein EscT VFG0825 Protein 2e-103 92