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Name : escU (ROD_30081) Accession : YP_003366514.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS structural protein EscU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 3175324 - 3176361 bp Length : 1038 bp Strand : - Note : - DNA sequence : ATGAGTGAAAAAACAGAAAAGCCTACACCTAAAAAAATTAGGGATTTAAAAAAGAAGGGCGATGTAACTAAAAGTGAAGA GGTAATGGCTGCTGTGCAGTCGTTAATCCTATTTTCATTTTTTTCTTTATATGGCGCAAGTTTTTTTATTGAGGTTGCAG GAGTAGTTAATACAACTATAAACTCGCTTAATGAACCATTTTTATATTCCATACACGAAATATTAGGAGCTGTGTTAAAA ATATTTTTATTATATGTTTTACCAATTGTTCTTTTTGTGTTTGTAGGTACTGTTGCGACCGGTGTATCACAAATAGGATT CATCTTTGCGGTGGAAAAAATAAAGCCATCAGCTCAGAAGATTAGTATAAAAAACAACCTAAAAAATATTTTTTCAGTGA AGAGTATTTTTGAATTACTTAAATCAGTATTTAAGTTGGTGATTATCTCTCTAATTTTTTACTTTATGGGAAATACATAT GCGAGTGAATTTGTTAATTTTACAAGACTAAATGCCTATCAGACTCTTGTTATTATCGCTTTTTTTATTTTTCTTTTATG GAAAGGTGTGTTATTCGGATATTTGCTCTTTTCGGTGTTTGATTTTTGGTTCCAGAAACATGAGGGATTGAAAAAAATGA AAATGAGTAAAGATGAGGTGAAACGAGAAGCCAAAGATACTGATGGTAACCCTGAAATTAAAGGCGAACGCAGGCGTCTT CATTCCGAGATACAAAGTGGAAGTCTGGCTAATAACATCAAAAAATCAACTGTTATTGTCAAAAATCCGACTCATATTGC AGTCTGTCTGTACTACAAACTTGGTGAGACCCCATTACCTTTAGTGATTGAAACAGCAAAAGATGCCAAAGCACTACAAA TCATTAAACTTGCGGAATTATATAATATTCCAGTGATTGAAGATATTCCATTGGCAAGAAGCCTCTATAAGAACATACAT AAAGGGCAATATATAACAGAAGACTTTTTTGAACCTGTTGCACAATTGATCCGTATTGCAATGGATATTGATTATTAA Protein sequence : MSEKTEKPTPKKIRDLKKKGDVTKSEEVMAAVQSLILFSFFSLYGASFFIEVAGVVNTTINSLNEPFLYSIHEILGAVLK IFLLYVLPIVLFVFVGTVATGVSQIGFIFAVEKIKPSAQKISIKNNLKNIFSVKSIFELLKSVFKLVIISLIFYFMGNTY ASEFVNFTRLNAYQTLVIIAFFIFLLWKGVLFGYLLFSVFDFWFQKHEGLKKMKMSKDEVKREAKDTDGNPEIKGERRRL HSEIQSGSLANNIKKSTVIVKNPTHIAVCLYYKLGETPLPLVIETAKDAKALQIIKLAELYNIPVIEDIPLARSLYKNIH KGQYITEDFFEPVAQLIRIAMDIDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06357.1 | EscU | Virulence | LEE | Protein | 1e-158 | 99 |
| escU | AAL57530.1 | EscU | Virulence | LEE | Protein | 4e-152 | 92 |
| escU | YP_003223487.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 6e-152 | 92 |
| escU | CAI43886.1 | EscU protein | Virulence | LEE | Protein | 4e-152 | 92 |
| escU | CAC81850.1 | EscU protein | Virulence | LEE II | Protein | 1e-151 | 92 |
| escU | AAK26703.1 | EscU | Virulence | LEE | Protein | 4e-152 | 92 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 2e-151 | 92 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 6e-151 | 91 |
| escU | AAC31525.1 | L0046 | Virulence | LEE | Protein | 6e-151 | 91 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 7e-151 | 91 |
| escU | ACU09470.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 6e-151 | 91 |
| escU | NP_290280.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 7e-151 | 91 |
| ECs4580 | NP_312607.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 7e-151 | 91 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-124 | 75 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-124 | 75 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| escU | YP_003366514.1 | T3SS structural protein EscU | VFG0824 | Protein | 3e-151 | 91 |
| escU | YP_003366514.1 | T3SS structural protein EscU | VFG0718 | Protein | 3e-151 | 91 |
