|
Name : cesD (ROD_30011) Accession : YP_003366510.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS chaperone CesD Function : - COG functional category : - COG ID : - EC number : - Position : 3171942 - 3172397 bp Length : 456 bp Strand : + Note : - DNA sequence : ATGAGCACAAAATTTAGCTCCCTAGAGGAAATCTATGATTTCTACCAGAATGGTGGCACATTAGCGTCATTGACAAATCT GACGCAACAAGATCTCAATGATCTTCATTCTTATGCCTATACAGTATATCAATCTGGTGATATTATAACCGCAAGAAATC TATTCCATTTGCTAACATATCTGGAGCACTGGAATTATGACTACACCTTATCTCTGGGCTTATGTCATCAACGTTTATCA AATCATGAAGATGCACAACTGTGTTTTGCTCGTTGTGCAACCTTAGTTATGCAAGATCCCAGAGCATCTTATTATTCTGG TATCAGCTACTTACTTGTGGGAAATCGAAAAATGGCCAAAAAAGCCTTTAAGGCTTGTCTGATGTGGTGTAATGAACAAG AAAAATATTCTACATATAAAGAAAATATTAAAAAACTATTAGATAATACAGATTAA Protein sequence : MSTKFSSLEEIYDFYQNGGTLASLTNLTQQDLNDLHSYAYTVYQSGDIITARNLFHLLTYLEHWNYDYTLSLGLCHQRLS NHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAKKAFKACLMWCNEQEKYSTYKENIKKLLDNTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06361.1 | CesD | Virulence | LEE | Protein | 3e-65 | 100 |
| cesD | CAC81854.1 | CesD protein | Virulence | LEE II | Protein | 9e-64 | 95 |
| cesD | YP_003232145.1 | T3SS chaperone CesD | Not tested | LEE | Protein | 1e-63 | 95 |
| cesD | CAI43882.1 | CesD protein | Virulence | LEE | Protein | 9e-64 | 95 |
| cesD | AAK26707.1 | CesD | Virulence | LEE | Protein | 9e-64 | 95 |
| cesD | AAL57534.1 | CesD | Virulence | LEE | Protein | 9e-64 | 95 |
| cesD | YP_003223483.1 | chaperone CesD | Not tested | LEE | Protein | 1e-63 | 95 |
| cesD | AAC38376.1 | CesD | Virulence | LEE | Protein | 1e-57 | 94 |
| cesD | AAC31521.1 | L0042 | Virulence | LEE | Protein | 1e-57 | 94 |
| cesD | YP_003236096.1 | chaperone CesD | Not tested | LEE | Protein | 2e-57 | 94 |
| cesD | ACU09466.1 | CesD protein | Virulence | LEE | Protein | 1e-57 | 94 |
| cesD | NP_290276.1 | hypothetical protein | Virulence | LEE | Protein | 2e-57 | 94 |
| ECs4576 | NP_312603.1 | CesD | Virulence | LEE | Protein | 2e-57 | 94 |
| cesD | AFO66326.1 | putative LEE-encoded type III secretion system chaperone | Virulence | SESS LEE | Protein | 2e-51 | 80 |
| cesD | AFO66407.1 | putative LEE-encoded type III secretion system chaperone | Virulence | SESS LEE | Protein | 2e-51 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cesD | YP_003366510.1 | T3SS chaperone CesD | VFG0820 | Protein | 5e-58 | 94 |
| cesD | YP_003366510.1 | T3SS chaperone CesD | VFG0722 | Protein | 5e-58 | 94 |
