Gene Information

Name : escJ (ROD_29981)
Accession : YP_003366507.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS structural protein EscJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 3169357 - 3169929 bp
Length : 573 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAACGCATTAAAAATACTTTTTTATTGATTGCTATTTGTTTGACAGTTGCATGTAAAGAGCAATTGTATACAGG
ATTAACGGAAAAAGAAGCCAATCTGATGCAAGCATTGTTGCTATCCAATGATGTTAATGTTTCTAAAGAAATGGATAAAA
GTGGAAATGTAACGATTAGTGTGGAAAAAGAGGATTTTGTTCGCGCGATAACTATTTTAAATAACAATGGTTTTCCAAAA
AAGAAATTTGCAGATATTGAGGTTATTTTTCCGCCAAGCCAGTTAGTTACATCACCATCACAAGAAAATGCCAAAATCAA
CTATCTCAAAGAACAAGATATAGAAAGGTTGTTAAGTAAAATCCCAGGTGTTATCGATTGCAGCGTCTCATTAAATGTCA
ACAATAACGAGAGCCAACCATCCTCAGCAGCTGTTTTAGTCATTAGCTCGCCAGAGGTTAACTTAGCACCATCTGTTATT
CAGATAAAAAACTTAATTAAGAATAGTGTAGACGATCTCAAATTAGAAAATATTAGTGTCGTTATCAAGTCATCCTCAGG
ACATGACGGGTAA

Protein sequence : 
MKKRIKNTFLLIAICLTVACKEQLYTGLTEKEANLMQALLLSNDVNVSKEMDKSGNVTISVEKEDFVRAITILNNNGFPK
KKFADIEVIFPPSQLVTSPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVI
QIKNLIKNSVDDLKLENISVVIKSSSGHDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06364.1 EscJ Virulence LEE Protein 1e-82 100
escJ AAL57537.1 EscJ Virulence LEE Protein 5e-78 96
escJ YP_003223480.1 T3SS structure protein EscJ Virulence LEE Protein 7e-78 96
escJ CAC81857.1 EscJ protein Virulence LEE II Protein 5e-78 96
escJ YP_003232148.1 T3SS structure protein EscJ Virulence LEE Protein 7e-78 96
escJ CAI43879.1 EscJ protein Virulence LEE Protein 5e-78 96
escJ YP_003236093.1 T3SS structure protein EscJ Virulence LEE Protein 2e-78 96
escJ AAC38379.1 EscJ Virulence LEE Protein 1e-78 96
escJ NP_290273.1 hypothetical protein Virulence LEE Protein 2e-78 96
escJ AAC31518.1 L0039 Virulence LEE Protein 1e-78 96
ECs4573 NP_312600.1 EscJ Virulence LEE Protein 2e-78 96
escJ ACU09463.1 EscJ protein Virulence LEE Protein 1e-78 96
escJ AAK26710.1 EscJ Virulence LEE Protein 5e-78 96
escJ AFO66320.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-60 65
escJ AFO66410.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-60 65
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
escJ YP_003366507.1 T3SS structural protein EscJ VFG0725 Protein 5e-79 96
escJ YP_003366507.1 T3SS structural protein EscJ VFG0817 Protein 5e-79 96