Gene Information

Name : mpc (ROD_29951)
Accession : YP_003366504.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS regulator Mpc
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3168052 - 3168405 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGAATCTTTTAATTAAAAGAAATGTAGAGGAATTTTTAAGATTATTGGGAAATGATTTTTATTTGCTTGATAATCGTGT
TGAAATTGATTTTAATGGTTTTTCTTTTTTTATTGAGGTAATTGGTGGTAATCTTTTTTTTACATTTGCTTTAGAGTATA
ACGAAAATGCATTTTTTTCTTTCTTCAGTGCCCTTGCCCCTGAGCGGACGCAGGGGGTGATTGAACATATCTTTGTCTAC
GATAATAAATTATGTTTAAGTTATTTGTTAACTAATATCGATGTGTTATCTTTAATGAATACTTTTCAACAGCATGTGCA
GATTATTGAGCGAGTTCGCAGGATGACATCATGA

Protein sequence :
MNLLIKRNVEEFLRLLGNDFYLLDNRVEIDFNGFSFFIEVIGGNLFFTFALEYNENAFFSFFSALAPERTQGVIEHIFVY
DNKLCLSYLLTNIDVLSLMNTFQQHVQIIERVRRMTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06367.1 unknown Not tested LEE Protein 6e-49 100
unnamed AAK26713.1 unknown Not tested LEE Protein 6e-45 93
mpc YP_003223477.1 regulator Mpc Not tested LEE Protein 8e-45 93
unnamed AAL57540.1 unknown Not tested LEE Protein 6e-45 93
mpc YP_003232151.1 regulator Mpc Not tested LEE Protein 8e-45 93
unnamed CAI43876.1 hypothetical protein Not tested LEE Protein 6e-45 93
unnamed ACU09460.1 ST22 protein Virulence LEE Protein 8e-44 92
Z5121 NP_290270.1 hypothetical protein Not tested LEE Protein 1e-43 92
st22 CAC81860.1 ST22 protein Not tested LEE II Protein 1e-44 92
ECs4570 NP_312597.1 hypothetical protein Not tested LEE Protein 1e-43 92
unnamed AAC38381.1 Orf12 Not tested LEE Protein 8e-44 92
unnamed AAC31515.1 L0036 Not tested LEE Protein 8e-44 92
mpc YP_003236090.1 regulator Mpc Not tested LEE Protein 1e-43 92
SESS1296_03646 AFO66335.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 8e-28 50
SESS1635_03859 AFO66413.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 8e-28 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mpc YP_003366504.1 T3SS regulator Mpc VFG0728 Protein 3e-44 92
mpc YP_003366504.1 T3SS regulator Mpc VFG0814 Protein 3e-44 92