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Name : ROD_29921 (ROD_29921) Accession : YP_003366501.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS component Function : - COG functional category : - COG ID : - EC number : - Position : 3164324 - 3164701 bp Length : 378 bp Strand : - Note : - DNA sequence : ATGTTGGACAGAATTTTATCTATTCGTAGAAATAGAGCGAATCGTTTGAGGGAGTCGATGGCCAGGATTAACTCTCAGAT AAGAGAAATTGATGGCAAACTCGATGACTGTGAGCAAGCCATTAAAGAATCGATCGCGGCTAAGCAAGCGTATTGTGCAT CGCTGGTGAATTTGGATAAAGTATCTTTATACAAATATCAGATAAAAAATAATGCATTTGATGAACAAAAACAGCGATTA TATGAGAAAAAAATCTTGATATCTAAAGAAAAAAGCTCCTTGCTTGAATCGCAAAAAAGAATAAAAGAGAATATACAACG TGTTAATAAGTCAATAGAAAAATTATCTTTTGCCTTAAAGGAGCATTACCTTGACTAG Protein sequence : MLDRILSIRRNRANRLRESMARINSQIREIDGKLDDCEQAIKESIAAKQAYCASLVNLDKVSLYKYQIKNNAFDEQKQRL YEKKILISKEKSSLLESQKRIKENIQRVNKSIEKLSFALKEHYLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06370.1 | unknown | Not tested | LEE | Protein | 1e-42 | 100 |
| ECO26_5272 | YP_003232154.1 | T3SS component protein | Virulence | LEE | Protein | 2e-39 | 87 |
| st25 | CAC81863.1 | ST25 protein | Not tested | LEE II | Protein | 1e-39 | 87 |
| ECO111_3751 | YP_003236087.1 | putative T3SS component protein | Virulence | LEE | Protein | 1e-39 | 87 |
| unnamed | CAI43873.1 | hypothetical protein | Not tested | LEE | Protein | 1e-39 | 87 |
| unnamed | ACU09457.1 | ST25 protein | Not tested | LEE | Protein | 2e-39 | 86 |
| unnamed | AAK26716.1 | unknown | Not tested | LEE | Protein | 8e-39 | 86 |
| ECO103_3617 | YP_003223474.1 | T3SS component | Virulence | LEE | Protein | 4e-39 | 86 |
| unnamed | AAL57543.1 | unknown | Not tested | LEE | Protein | 8e-39 | 86 |
| unnamed | AAC38384.1 | Orf15 | Not tested | LEE | Protein | 2e-39 | 86 |
| Z5118 | NP_290267.1 | hypothetical protein | Not tested | LEE | Protein | 2e-39 | 86 |
| unnamed | AAC31512.1 | L0033 | Not tested | LEE | Protein | 2e-39 | 86 |
| ECs4567 | NP_312594.1 | hypothetical protein | Not tested | LEE | Protein | 2e-39 | 86 |
| SESS1296_03649 | AFO66333.1 | putative LEE-encoded putative type III secretion system factor | Virulence | SESS LEE | Protein | 4e-16 | 42 |
| SESS1635_03862 | AFO66416.1 | putative LEE-encoded putative type III secretion system factor | Virulence | SESS LEE | Protein | 4e-16 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_29921 | YP_003366501.1 | T3SS component | VFG0811 | Protein | 6e-40 | 86 |
| ROD_29921 | YP_003366501.1 | T3SS component | VFG0731 | Protein | 6e-40 | 86 |
