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Name : ROD_29911 (ROD_29911) Accession : YP_003366500.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS component Function : - COG functional category : - COG ID : - EC number : - Position : 3163915 - 3164331 bp Length : 417 bp Strand : - Note : Contains additional 36 aa at N-terminal from Crod LEE published sequence, in accordance with E. coli homologues. DNA sequence : TTGACTAGAGTTTCTCTAAAAAGAAATTTGATAGAGCCTGTTTCTTTTCGGCCATTAGATGACTGGTCACAAGGAGAAGA AAATTTTAATGATATTCTTAATCGTATGAAAAAAAGATCGCCAGATACTTTGTTCATACGAATGGCTTCTTTATGGAAGA AATTGTTTTACTTCCCTGGCAAACGGCGGCGATATTTTGAACAAGAGGAGCACTCGTTTAGTATCATATGTGGAAGATTA CGTGGTATTGTTGTAACATTTAAATGTAGTAAGGGAATAATTTATCTTTCTATTAAAGTAAACCCTAATAACAGTAAACA CATTTTATTATATAATAAAAAAGAGTATATTTTTGATAAATTAAAAGAGCTCTTTCCAGATGAAGCCATTGAATTCTCAA TCGAATATGAAAATTAA Protein sequence : MTRVSLKRNLIEPVSFRPLDDWSQGEENFNDILNRMKKRSPDTLFIRMASLWKKLFYFPGKRRRYFEQEEHSFSIICGRL RGIVVTFKCSKGIIYLSIKVNPNNSKHILLYNKKEYIFDKLKELFPDEAIEFSIEYEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06371.1 | unknown | Not tested | LEE | Protein | 1e-44 | 99 |
| ECs4566 | NP_312593.1 | hypothetical protein | Not tested | LEE | Protein | 2e-52 | 81 |
| unnamed | ACU09456.1 | conserved hypothetical protein | Not tested | LEE | Protein | 1e-52 | 81 |
| ECO111_3750 | YP_003236086.1 | putative T3SS component protein | Virulence | LEE | Protein | 2e-52 | 79 |
| unnamed | AAC38385.1 | Orf16 | Not tested | LEE | Protein | 5e-52 | 79 |
| ECO103_3616 | YP_003223473.1 | T3SS component | Virulence | LEE | Protein | 2e-49 | 79 |
| ECO26_5273 | YP_003232155.1 | T3SS component protein | Virulence | LEE | Protein | 2e-49 | 79 |
| unnamed | AAK26717.1 | unknown | Not tested | LEE | Protein | 2e-49 | 78 |
| SESS1296_03650 | AFO66328.1 | putative LEE-encoded putative type III secretion system factor | Virulence | SESS LEE | Protein | 5e-16 | 41 |
| SESS1635_04950 | AFO66417.1 | putative LEE-encoded putative type III secretion system factor | Virulence | SESS LEE | Protein | 5e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_29911 | YP_003366500.1 | T3SS component | VFG0732 | Protein | 2e-52 | 79 |
