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Name : map (ROD_29871) Accession : YP_003366496.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS effector protein Map Function : - COG functional category : - COG ID : - EC number : - Position : 3161144 - 3161755 bp Length : 612 bp Strand : - Note : - DNA sequence : ATGTTTAATCCAACGGCAATGGTCGGTAGAGCGTTAGCTCAGGCGGCTACACAAACTCTTAGACCAGTGGTAACAAAGGC TGCAACACAAGCGGGCATGGGAGCCAGCGGTATGAGGTTCGTACCTGTGCAGTCGAACCTTATGATTAATCATGACAAAC TGACTGCTCAGCTACTAAAGGCCGTGGCCAAACAAACTGGTAATGGTGATACTCAGCAATGGTTCCGGCAGGAGCAGATT ACTTTTATATCCAAAACGGTAAACAAAACTGTGGATGACTATTGCATAAATAATAATTCGACAATTAATAAGGAGACTAA ACAGCACATTTTTAAAGCGGTTGAAAGCGTGATACAGCAGCCTCTTGATATAAATTGTGCACAATCATCAATCAGTCACT TTTTGCAATCTAATAAATATTTTAATAAGATAGTTGATGAGCAGTGCGGTAAAGGAGTGGATCCTATTACACGTTTTAAC ACTCAGACTAAGATGATAGACGATGTCTCATGCGAACTGTTTGAAAAGAATTTTAACTCCACGAAAGTGAGCGATATCAA AGCTATAACGCAGAGTGTGATTGCAGATTGTGTGCAGGATACCAGGCTGTAG Protein sequence : MFNPTAMVGRALAQAATQTLRPVVTKAATQAGMGASGMRFVPVQSNLMINHDKLTAQLLKAVAKQTGNGDTQQWFRQEQI TFISKTVNKTVDDYCINNNSTINKETKQHIFKAVESVIQQPLDINCAQSSISHFLQSNKYFNKIVDEQCGKGVDPITRFN TQTKMIDDVSCELFEKNFNSTKVSDIKAITQSVIADCVQDTRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06375.1 | unknown | Virulence | LEE | Protein | 4e-91 | 99 |
| map | YP_003236082.1 | T3SS secreted effector Map | Virulence | LEE | Protein | 1e-76 | 82 |
| unnamed | AAC38389.1 | Orf19 | Not tested | LEE | Protein | 3e-76 | 80 |
| unnamed | AAK26721.1 | unknown | Not tested | LEE | Protein | 2e-75 | 78 |
| unnamed | AAL57548.1 | unknown | Not tested | LEE | Protein | 2e-75 | 78 |
| st30 | CAC81868.1 | ST30 protein | Not tested | LEE II | Protein | 2e-75 | 78 |
| map | YP_003232159.1 | T3SS effector Map | Virulence | LEE | Protein | 2e-75 | 78 |
| map | YP_003223469.1 | T3SS effector Map | Virulence | LEE | Protein | 9e-75 | 77 |
| unnamed | CAI43868.1 | hypothetical protein | Not tested | LEE | Protein | 6e-75 | 77 |
| Z5113 | NP_290262.1 | hypothetical protein | Not tested | LEE | Protein | 7e-70 | 73 |
| ECs4562 | NP_312589.1 | hypothetical protein | Not tested | LEE | Protein | 7e-70 | 73 |
| unnamed | AAC31507.1 | L0028 | Not tested | LEE | Protein | 4e-70 | 73 |
| unnamed | ACU09452.1 | IpaB/EvcA family protein | Not tested | LEE | Protein | 4e-70 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| map | YP_003366496.1 | T3SS effector protein Map | VFG0736 | Protein | 1e-76 | 80 |
| map | YP_003366496.1 | T3SS effector protein Map | VFG0806 | Protein | 2e-70 | 73 |
