Gene Information

Name : sepL (ROD_29771)
Accession : YP_003366491.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS secretion switching protein SepL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3151716 - 3152771 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAATGGTATTGAATTTAATCAAAATATCTCATCTGTTTTTAATTCTAATTCATTAGAATTTGAATTGGAATCTCA
ACAGTTAACACAAAAAAATACTTCTAATACTTCTTCACCATTATTAAATTTGCAAAATGAATTGGCAATGATTACTAATT
CATCACTTGCGGAAACGATTGAAGGGTTAAGCCTGGGATATCGCAAAGGTAGCGCGAGAAAAGAAGAGGAAGGTACGATA
ACAGAGAAGTTGCTCAATGATATGCAAGAGCTGCTCACTCTTACAGATACTGATAAGTTAAAAGAACTTTCATTAAAAAA
TGGTGGATTGCTGGAACAACACGATCCTACTTTGGCGATGTTTGGCAATATGCCAAAAGGGGAAATTGTTGCTCTAATAT
CTTCTTTATTGCAATCTAAGTTTGTTAAGATTGAATTAAAAAAGAAATATGCAAAATTATTATTAGATTTATTAGGTGAG
GATGATTGGGAGTTGGCCCTGCTTGCCTGGTTAGGAGTGGGGGAGTTAAATCAGGAAGGCATCCAGAAGATCAAGAAGCT
TTATGAAAAGGCTAAGGATGAGGATTCTGAAAATGGAGCCTCTTTACTTGACTGGTTTATGGAGATCAAGGATCTTCCTG
AGAGAGAGAAACACTTAAAAGTTATTATAAGGGCGCTATCATTTGATTTGTCTCATATGGCCTCTTATGAAGATAAAGTA
AAAACATCTTCAATCATTAGCGATTTATACAGGGTTATCATTTTTTTATCCCTTGATAATTACACAGATATCATTGCAAT
CTCTATAAAGAAAAATAAAGATATTATTTTAAATGAAATGCTATCTATTATTGAACATGTATGGCTAACCGAAGACTGGC
TACTGGAGAGTGTTTCTCGGGTATCCATAGTTGAAGATAAACATGTTTATTATTTCCATTTATTGAAAGACTTTTTTGCA
ACATTACCAGATGCTTGTTTTACTGATAGTGAACAGAGAGATAATATATTATCAATGATCGGAAAAGTAATCGATTATAA
GGAGGATGTTATGTGA

Protein sequence : 
MANGIEFNQNISSVFNSNSLEFELESQQLTQKNTSNTSSPLLNLQNELAMITNSSLAETIEGLSLGYRKGSARKEEEGTI
TEKLLNDMQELLTLTDTDKLKELSLKNGGLLEQHDPTLAMFGNMPKGEIVALISSLLQSKFVKIELKKKYAKLLLDLLGE
DDWELALLAWLGVGELNQEGIQKIKKLYEKAKDEDSENGASLLDWFMEIKDLPEREKHLKVIIRALSFDLSHMASYEDKV
KTSSIISDLYRVIIFLSLDNYTDIIAISIKKNKDIILNEMLSIIEHVWLTEDWLLESVSRVSIVEDKHVYYFHLLKDFFA
TLPDACFTDSEQRDNILSMIGKVIDYKEDVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06380.1 SepL Virulence LEE Protein 4e-133 99
sepL AAK26726.1 SepL Virulence LEE Protein 1e-123 92
sepL AAL57553.1 SepL Virulence LEE Protein 1e-123 92
sepL YP_003232164.1 secretion switching protein SepL Not tested LEE Protein 2e-123 92
sepL AAC38393.1 SepL Virulence LEE Protein 5e-125 92
sepL CAI43863.1 SepL protein Virulence LEE Protein 5e-123 92
sepL CAC81873.1 SepL protein Not tested LEE II Protein 5e-123 92
sepL YP_003223464.1 secretion switching protein SepL Virulence LEE Protein 7e-123 92
speL ACU09447.1 secretion switching protein SpeL Virulence LEE Protein 3e-123 91
sepL NP_290257.1 hypothetical protein Virulence LEE Protein 4e-123 91
ECs4557 NP_312584.1 SepL Virulence LEE Protein 4e-123 91
sepL YP_003236077.1 secretion switching protein SepL Not tested LEE Protein 1e-119 91
sepL AAC31502.1 L0023 Virulence LEE Protein 3e-123 91
sepL AFO66306.1 putative LEE-encoded type III secretion system component Virulence SESS LEE Protein 2e-84 71
sepL AFO66390.1 putative LEE-encoded type III secretion system component Virulence SESS LEE Protein 2e-84 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sepL YP_003366491.1 T3SS secretion switching protein SepL VFG0741 Protein 3e-125 92
sepL YP_003366491.1 T3SS secretion switching protein SepL VFG0801 Protein 2e-123 91