Gene Information

Name : espA (ROD_29761)
Accession : YP_003366490.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS translocator protein EspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3151081 - 3151659 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence :
ATGGATACATCAACTATGACATCAGTTGCTGGTGCGAGCGCGAGTACTTCGACATCGATGACCTATGATTTAGGAAGCAT
GTCGAAAGAAAAAGTTATTGAGCTTTTTGCAAAAGTTGGCGTATTTCAGGCAGCGCTTCTCATGTTTGAGTATATGTTTC
ACGCACAAAGCGAACTGTCGATTGCAAAGTTTGCAGATATGAATGAGGCATCCAAGGCGTCAATCACGGCCCAAAAAATG
GCCAATCTTGTAGATGCTAAAATTGCCGATGTTCAGAGTAGTTCTGACAAGAATGCGAAGGCCAAACTTCCTCAAGAAGT
TATTGACTATATAAGTGATTCTCGCAATAGTATTACAGTAAGTGGTATTAGTGATCTTACGGCTGAGTTAAGCGCCGGTG
ATTTGCAAACCGTGAAGGCTTCTATTTCGGCTAAAGCGAATAATTTGACAACGACGGTGGATAATAGCCGTCTTGATATA
CAGCAGATGACAAATACTTTAAACCTGTTAACGAGTGCTCGTTCTGATATTCAGTCATTACAATACAGAACTGTTTCAGC
AATACCCATTGGCAAATAA

Protein sequence :
MDTSTMTSVAGASASTSTSMTYDLGSMSKEKVIELFAKVGVFQAALLMFEYMFHAQSELSIAKFADMNEASKASITAQKM
ANLVDAKIADVQSSSDKNAKAKLPQEVIDYISDSRNSITVSGISDLTAELSAGDLQTVKASISAKANNLTTTVDNSRLDI
QQMTNTLNLLTSARSDIQSLQYRTVSAIPIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06381.1 EspA Virulence LEE Protein 7e-74 99
espA AAK26727.1 EspA Virulence LEE Protein 9e-67 85
espA YP_003232165.1 translocator EspA Virulence LEE Protein 1e-66 85
espA AAL57554.1 EspA Virulence LEE Protein 9e-67 85
espA CAC81874.1 EspA protein Virulence LEE II Protein 9e-67 85
espA AAO66617.1 EspA beta variant Virulence LEE Protein 5e-65 81
espA AAC31501.1 L0022 Virulence LEE Protein 7e-64 80
espA ACU09446.1 secreted protein EspA Virulence LEE Protein 7e-64 80
espA NP_290256.1 hypothetical protein Virulence LEE Protein 1e-63 80
espA AAC38394.1 EspA Virulence LEE Protein 3e-64 80
ECs4556 NP_312583.1 protein EspA Virulence LEE Protein 1e-63 80
espA CAI43862.1 EspA protein Virulence LEE Protein 1e-64 80
espA YP_003236076.1 translocon EspA Virulence LEE Protein 4e-64 80
espA YP_003223463.1 translocon EspA Virulence LEE Protein 2e-64 80
espA AFO66319.1 putative secreted protein EspA Not tested SESS LEE Protein 5e-60 76
espA AFO66389.1 putative secreted protein EspA Virulence SESS LEE Protein 5e-60 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espA YP_003366490.1 T3SS translocator protein EspA VFG0742 Protein 1e-64 80
espA YP_003366490.1 T3SS translocator protein EspA VFG0800 Protein 3e-64 80