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Name : ROD_29711 (ROD_29711) Accession : YP_003366485.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS component Function : - COG functional category : - COG ID : - EC number : - Position : 3147965 - 3148261 bp Length : 297 bp Strand : - Note : - DNA sequence : ATGGGTAATGATATTTCTGCCAATAAGATAATGGTATGGGCGGCTGTAGCAGCGGCAAATCATAAGCTTCCAAAATATGC AGAATCTATTCTGAATGTATTGCCGCAAATCTTATCAGATAAAAAAGATATTGCACATTTAGAATTCATTATTTTATATG GGTTAAATAAAAAAAATGATGCAGTAAAGGCTCTTGAGGGCTATATGGATGATCAGACAAGCCAGTTGTTGTATAGCCTG GTCTGTGAAAACAAGAGACAAGAGAGAGAGGACTCTGATAGATTAATTTTATATTGA Protein sequence : MGNDISANKIMVWAAVAAANHKLPKYAESILNVLPQILSDKKDIAHLEFIILYGLNKKNDAVKALEGYMDDQTSQLLYSL VCENKRQEREDSDRLILY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06386.1 | unknown | Not tested | LEE | Protein | 4e-40 | 100 |
| ECO103_3601 | YP_003223458.1 | T3SS component | Virulence | LEE | Protein | 9e-29 | 87 |
| unnamed | AAK26732.1 | unknown | Not tested | LEE | Protein | 6e-29 | 87 |
| ECO26_5288 | YP_003232170.1 | T3SS component | Virulence | LEE | Protein | 9e-29 | 87 |
| unnamed | AAL57559.1 | unknown | Not tested | LEE | Protein | 6e-29 | 87 |
| st41 | CAC81879.1 | ST41 protein | Not tested | LEE II | Protein | 6e-29 | 87 |
| unnamed | CAI43857.1 | hypothetical protein | Not tested | LEE | Protein | 6e-29 | 87 |
| Z5102 | NP_290251.1 | hypothetical protein | Not tested | LEE | Protein | 2e-27 | 86 |
| unnamed | AAC31496.1 | L0017 | Not tested | LEE | Protein | 1e-27 | 86 |
| ECs4551 | NP_312578.1 | hypothetical protein | Not tested | LEE | Protein | 2e-27 | 86 |
| unnamed | ACU09441.1 | type III secretion system protein SsaH family | Virulence | LEE | Protein | 1e-27 | 86 |
| ECO111_3735 | YP_003236071.1 | T3SS component | Virulence | LEE | Protein | 2e-27 | 85 |
| unnamed | AAC28566.1 | unknown protein | Not tested | LEE | Protein | 1e-27 | 85 |
| unnamed | AAC38399.1 | Orf29 | Not tested | LEE | Protein | 3e-27 | 85 |
| unnamed | AAL60255.1 | unknown | Not tested | LEE | Protein | 6e-26 | 83 |
| SESS1296_03617 | AFO66342.1 | putative LEE-encoded putative type III secretion system factor | Not tested | SESS LEE | Protein | 1e-18 | 56 |
| SESS1635_03834 | AFO66384.1 | putative LEE-encoded putative type III secretion system factor | Virulence | SESS LEE | Protein | 1e-18 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_29711 | YP_003366485.1 | T3SS component | VFG0795 | Protein | 5e-28 | 86 |
| ROD_29711 | YP_003366485.1 | T3SS component | VFG0747 | Protein | 1e-27 | 85 |
