Gene Information

Name : ROD_29661 (ROD_29661)
Accession : YP_003366481.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : ISEc14 transposase A
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3143523 - 3143807 bp
Length : 285 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCACACCACGATTTACACCTGAATTTAAGGAAGAAGCCGTCCGTCAGATAACGGAACGCGGTTATTCCGTCGCCGA
AGTATCTGACCGTCTGGGCGTCTCTGCACACAGCCTCTACAAGTGGCTACGGGCTATCAAACCTGATAACAGCGAGCAGC
ATGCCCGGGATTTACTGGAAGCGAAAAGCGAGATCCTGAAACTCCGGGCGCAGCTAAAACGCACCGAAGAAGAACGGGAT
ATCCTGAAAAAGGCCGCGCGGTACTTTGCAAGGGAGCCCGACTGA

Protein sequence : 
MGTPRFTPEFKEEAVRQITERGYSVAEVSDRLGVSAHSLYKWLRAIKPDNSEQHARDLLEAKSEILKLRAQLKRTEEERD
ILKKAARYFAREPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 3e-27 70
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-12 43
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-12 43
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 3e-12 42
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 3e-12 42
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-09 42
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-09 42
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-12 41
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 5e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_29661 YP_003366481.1 ISEc14 transposase A VFG1707 Protein 2e-12 41