Gene Information

Name : ROD_29091 (ROD_29091)
Accession : YP_003366429.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3077862 - 3078485 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCTGGCGTATCGATTACCTGATTGAGAAATATCACTTCACCGAAATCAATGAGTCGCCACGCATCGCCAGCCAATG
GAAGGATGTTCTGAACGAATGCCACCAGGAACGGGCGGGCGTTGAGGAGCGACTGCGTATTGCGCTACTCAATGTTGATT
ACGTCACCAGTTTTGAGCTGCCTTTTCGTTTACTTCTCACCCGCGCCCCGCAGCTTATCGATAAGCTGCGCAAAGAGTTT
TCCCTCACCCAGAAAAATGTCGTCATCAATGAAAAGCGTCGCGGCCAGGTGTACAGCATTAGCGCCGATCTCAGTCATGT
ACCGGACGCTTTTCGCTATCGCTTATCTTCGCGCGTTCGCCGGATGGACGATCACACCCTCACCACCGCCCCGTATCAGC
AGGTCGCCAGCCAGACAAAACTGCCCGAGGAGCGTCTGCGCCTGGCGCTGGAGAGTGGGTTAGCAGTGAATGCTCTCGAC
GGGCTTTTCTGGTTAGGGATCCAGCGCATCGCCGCCGATATTCAGCGACTGCGTGCCGGCGGCATGGCAATTCAGACTGC
AGATGTTGAAGTGTTTGATACCCTGACGGGAACGCTGAGAACCATAACCGCCTATTATCTGTAG

Protein sequence : 
MAWRIDYLIEKYHFTEINESPRIASQWKDVLNECHQERAGVEERLRIALLNVDYVTSFELPFRLLLTRAPQLIDKLRKEF
SLTQKNVVINEKRRGQVYSISADLSHVPDAFRYRLSSRVRRMDDHTLTTAPYQQVASQTKLPEERLRLALESGLAVNALD
GLFWLGIQRIAADIQRLRAGGMAIQTADVEVFDTLTGTLRTITAYYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42058.1 hypothetical protein Not tested PAI II 536 Protein 2e-61 67
unnamed ADD91729.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 1e-61 67
Z1195 NP_286730.1 hypothetical protein Not tested TAI Protein 3e-59 66
Z1635 NP_287138.1 hypothetical protein Not tested TAI Protein 3e-59 66
Z1635 AAQ19121.1 Z1635-like protein Not tested PAI I CL3 Protein 4e-60 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_29091 YP_003366429.1 hypothetical protein VFG1577 Protein 1e-61 67