Gene Information

Name : ROD_29061 (ROD_29061)
Accession : YP_003366426.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3710
EC number : -
Position : 3075733 - 3076515 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
GTGACTAACCCTGAACTTAACGTGGTTTTGACAACCCCAGCCAGTCGTTGTCTGCTCCTGCTGCTTGAGGCTTCCCCGGA
CGTGGTAACTCAGCAGGAGTTCTTCAAAAAAGTGTGGGAAGATGAAGGAATGCTGGTACCGGCGAATACCCTGTACCAGA
ACATTTCTATTGTTCGTCGTGGCTTGCGCGCGGTTGGCGAAACGGATCGCATTCTGGTGGCGACGGTGCCGCGCAAAGGC
TTCCAGATCGATAAAAGCGTCAAAATTACCCGCATCGCGGCAAATCAGATCCCGGAAACGGCGCCGGAAACGCTGGCTGG
CGAAGATGAACTGGACGTTGAATATAAAGCGGATGCCAGCCCGGAATTTGCTCCGGCTTCCGAGCCCGATCCCGCGCTGA
AAACGCCACAGGCCGCGAAACTTCCGCGTATGACGAGCATACTGATCATGGCGGCGGCTTTTCTTATTGGCGCAATGGCC
GTCCATTTTTTCTGGCATCTTACCGATACAAAACCGTTTTTCAGGGACTATGACTTTGTAGAACAGGATCAGGGCTGCCG
TTTTTATACCAAAGACGACAGTCATGACAACAACAGCAACTTTACGCGCTTTAAGACGCTGATCCTCAATTCAGGCCTCG
ACTGTAAAAAGTTTCCCTGGGTTTACTTTCCGGTGTCCAGGACCTCTCCCGGCCTGTCGGTTTTTGTCTGCCGTAAGGAC
TACGTCAAAAACCCGGTTGCGGGTTGTATCACCCTCTCTTTCAGAGGAGTAGAAAGTGAATAA

Protein sequence : 
MTNPELNVVLTTPASRCLLLLLEASPDVVTQQEFFKKVWEDEGMLVPANTLYQNISIVRRGLRAVGETDRILVATVPRKG
FQIDKSVKITRIAANQIPETAPETLAGEDELDVEYKADASPEFAPASEPDPALKTPQAAKLPRMTSILIMAAAFLIGAMA
VHFFWHLTDTKPFFRDYDFVEQDQGCRFYTKDDSHDNNSNFTRFKTLILNSGLDCKKFPWVYFPVSRTSPGLSVFVCRKD
YVKNPVAGCITLSFRGVESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 1e-61 47
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 4e-54 41
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 3e-54 41
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 4e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_29061 YP_003366426.1 transcriptional regulator VFG0570 Protein 2e-54 41