|
Name : ROD_28191 (ROD_28191) Accession : YP_003366347.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : Rhs protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 2980896 - 2982974 bp Length : 2079 bp Strand : + Note : - DNA sequence : ATGGCAGAGAAAGGACTGCGTTTCACGCTGGAAGTGGAAGGACAGCCCCCGGAAACCTTTGCGGTGGTCAGCTTCCGGCT GGTTCAGGATTATTCCGTTCCCTTTACGCTTGACGTGGATGTTGCCGGTGAGGGCTTCCGGCTGACGCCGGAAGCCCTGC TGGAGAAAGAGGCCGTGCTGACTATCCTGACCGGCGCCACAATGCAGCGCCGTATGAGGGGGATTGTCACCCATTTCGGC ATCCGTGATTACAACGGATGGCAGATCCGCCATCAGTTGATCATCCGTCCGCCGTTATGGCGCGCCGGGCTGCGACAGAA CTTCCGCATCTTCCAGCAGCAGGATATTCAGTCCATTACTGCCACATTACTGGACGAAAACGGCGTCACCGACTGGACGC CCTGCTTTTATGAGCATCATCCGCCCCGTGAATTCTGCGTTCAGTACGGCGAAACCGACCTGGCATTTCTGACACGACTG TGGTCAGAGGAAGGCATTTTCTTTTTTGAGCGCCAGGCGCACGAAGGCGATAAACAGACGCTGGTGCTGTGCGACAATGC CGCCGGATTAACCACCGCAGGCGACATGCCGTTTAATCCCAACCATACCACCGAAGCCTTCACCCGCTGTATCAGCGCCT TCAGCTATCTGGCGCAGATACGCCCCTCGTCGGTCAGTACCCGGGACTATACCTTTAAGGCCCCCTCCTGGCCGGGATGT TTCGACCGTGAAGGCGATAACCTGAACGGTCAGTACAGGCAGTATGAGATTTTTGATTACCCGGGCCGCTTTAAGGATGA GCAGCACGGTCAGGATTTCGCCCGCTATCAGGCGGAAGGCTGGCGCAGCAACGCCGAAACCGCCAGCGGCGAAAGCCACT CCCCGGCGCTGTGGCCGGGCGCGCAGGTCACGCTTACCGGACATCCGGTCCCTCCACTGAACCGGGCCTGGCAGATCATC AGCAGTACATTGACGGGAAAACAGCCGCAGGCGCTGAAAGGCAGCCGCGGTCCGGGCACCACGCTGGATAATCAGTTCAG CGTTATTCCTGGGGACAGAACATGGCGACCCCAGCCGCTGCTGAAGCCGAAAGTCGATGGTCCGCAGCCTGCCGTGGTGA CCGGACCGCCGGGCGAAGAGATCTTTTGCGATGAACATGGCCGGGTACGGGTGAAATTTATCTGGGACCGCTATCACGGC GAAAACGAAGACAGTTCCTGCTGGATACGGGTGTCACAGGCGTGGGCAGGCGCGGGATTTGGTAATCTGGCGGTTCCCCG CGTCGGTCAGGAAGTGATTGTGGACTTCCTCAACGGCGACCCGGACCAGCCGCTTATCATGGGGCGAACCTATCATGAAG ATAACCGTTCGCCGGGAGATTTACCCGGAACCAGAACGCAGATGACCATCCGTTCAAAAACGTATCAGGGCAGCGGCTTT AATGAACTGCGGTTTGAGGATGCGACCGGACAGGAACAGGTGTATATCCATGCGCAGAAGAACATGGATACCGAAGTGCT GAACAACCGCAGTACCGACGTGAAGGTCAACCACACGGAAACCATCGGCGGAAACCAGGTTATCACAGTGAAACAGAACC AGATGCAGACGGTGGTGCAGAACCAGCAGGAGAATATCGGCCAGAATCAGTCCGTCACCGTCGGGCTGAACCAGGCGGAA ACGGTGGGCGTGGCCCGTGCCCTGACGGTCGGAGTGGCGTATCAGACCACGGTGGGCGGCATGATGAACACCTCAGTGGC GCTGATGCAGGCTTCGCAGGTGGGAATACAGAAATCGCTGCTGGTCGGTAAAGGATATGACGTCAGCGTCGGGGAAAATG TCACATTTACGGTGGGGAAAAACCGGCAGGAAAGCGCAGGCAGGGTCGCCGTTTACTCCGCCGGCGAGCATCTGGAACTG CGCTGCGGGCAGGCGCGGCTGGTGCTGACGCAGGACGGCAGCATCTTTCTGAACGGCACGGCGATTAATTTGCAGGGAGT GCAGACCATCAGCGGCGATTCGCTGATGATTAACTGGAACTGCGGCGCGACAAAAAATCCTCCGGATGCGCCGGAGTAG Protein sequence : MAEKGLRFTLEVEGQPPETFAVVSFRLVQDYSVPFTLDVDVAGEGFRLTPEALLEKEAVLTILTGATMQRRMRGIVTHFG IRDYNGWQIRHQLIIRPPLWRAGLRQNFRIFQQQDIQSITATLLDENGVTDWTPCFYEHHPPREFCVQYGETDLAFLTRL WSEEGIFFFERQAHEGDKQTLVLCDNAAGLTTAGDMPFNPNHTTEAFTRCISAFSYLAQIRPSSVSTRDYTFKAPSWPGC FDREGDNLNGQYRQYEIFDYPGRFKDEQHGQDFARYQAEGWRSNAETASGESHSPALWPGAQVTLTGHPVPPLNRAWQII SSTLTGKQPQALKGSRGPGTTLDNQFSVIPGDRTWRPQPLLKPKVDGPQPAVVTGPPGEEIFCDEHGRVRVKFIWDRYHG ENEDSSCWIRVSQAWAGAGFGNLAVPRVGQEVIVDFLNGDPDQPLIMGRTYHEDNRSPGDLPGTRTQMTIRSKTYQGSGF NELRFEDATGQEQVYIHAQKNMDTEVLNNRSTDVKVNHTETIGGNQVITVKQNQMQTVVQNQQENIGQNQSVTVGLNQAE TVGVARALTVGVAYQTTVGGMMNTSVALMQASQVGIQKSLLVGKGYDVSVGENVTFTVGKNRQESAGRVAVYSAGEHLEL RCGQARLVLTQDGSIFLNGTAINLQGVQTISGDSLMINWNCGATKNPPDAPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 61 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 0.0 | 61 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-134 | 49 |
