Gene Information

Name : cts1S (ROD_27761)
Accession : YP_003366305.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T6SS protein Cts1S
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2929747 - 2930265 bp
Length : 519 bp
Strand : -
Note : SciH homologue, Duf770 component of T6SS

DNA sequence :
ATGAGCAAGAGTAACTCACAAAAATTTATCGCACGTAATCGTGCGCCGCGCGTACAAATTGAGTACGACGTAGAAATCTA
TGGCAGTGAAAAGAAAATTGAATTGCCGTTCGTGATGGGCGTGCTGGCGGATTTATCCGGTAAACCGCTGGAGCCGCTGC
CGCCTGTGGCAGACCGCAAATTCCTGAGTGTCGATATTGATAACTTTGACGAGCGTATGAAAGCCATGCGTCCGCGTGTC
GCGTTCGCGGTGCCGAACACCTTAACGGGTGAAGGGCAACTGATGGTCGATATGACCTTCGAAAGCATGGATGATTTTTC
TCCGGATGCGATTGCCCGCAAAGTTGACTCGTTATCTCAGCTGCTTGAAGCCCGTACGCAGCTCGCCAATCTGCAGACCT
ATATGGACGGTAAAGCAGGCGCGGAGAGCCTGGTGATGAAGGTACTGAATGACAAGTCGCTGTTGAACACCCTGGCATCG
GCGCCAAAACCTGAACGGGCTGATGAAGTCGCGTCCTGA

Protein sequence :
MSKSNSQKFIARNRAPRVQIEYDVEIYGSEKKIELPFVMGVLADLSGKPLEPLPPVADRKFLSVDIDNFDERMKAMRPRV
AFAVPNTLTGEGQLMVDMTFESMDDFSPDAIARKVDSLSQLLEARTQLANLQTYMDGKAGAESLVMKVLNDKSLLNTLAS
APKPERADEVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-63 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cts1S YP_003366305.1 T6SS protein Cts1S VFG2069 Protein 4e-60 75