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Name : tktB (ROD_24131) Accession : YP_003365954.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : transketolase 2 Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2534436 - 2536430 bp Length : 1995 bp Strand : + Note : - DNA sequence : ATGTCCCGTAAAGAACTTGCCAACGCCATTCGTGCGCTCAGTATGGATGCCGTACAGAAAGCCAATTCCGGTCATCCCGG CGCCCCGATGGGGATGGCGGATATCGCTGAAGTGCTGTGGAACGACTTTCTGAAGCACAACCCGACCGACCCGACCTGGT ACGATCGTGACCGCTTTATTCTCTCAAATGGTCACGCTTCGATGCTGCTCTACAGCCTGCTGCACCTCACCGGCTACGAC CTGCCGCTGGAAGAGTTAAAAAACTTCCGCCAGCTGCACTCTAAAACCCCGGGACATCCGGAAATCGGCTACACGCCGGG CGTTGAAACCACCACCGGCCCGCTGGGTCAAGGGCTGGCGAACGCCGTTGGTCTGGCGATAGCGGAGCGCACGCTGGCCG CACAGTTTAACCAGCCGGAACATGAGATTGTCGATCACTACACCTACGTGTTTATGGGCGACGGCTGTCTGATGGAAGGG ATCTCCCATGAGGTCTGCTCGCTGGCCGGAACGCTGGGCCTCGGCAAGCTGATCGGCTTCTACGATCACAACGGTATTTC AATTGATGGCGAAACCGAAGGCTGGTTTACCGACGATACCGCCAGACGTTTCGAAGCTTACCACTGGCATGTGGTGCATG AAATCGACGGCCACGATCCGCAGGCGATAAAGAAAGCGATCGAGGAAGCGCAGAGCGTGACGGATAAACCGTCGCTGATT ATTTGCCGCACGGTTATTGGTTTTGGCTCGCCGAACAAGGCGGGTAAAGAGGAGTCTCACGGCGCGGCGCTGGGCGAAGA AGAGGTGGCGCTGACCCGCCAGAAGCTGGGCTGGCATCATCCGGCGTTTGAGATCCCAAAAGAGATTTATCGCGCCTGGG ATGCAAGAGAAAAAGGCGAGAAAGCGCAGCAGAGCTGGCAAGAAAAATTTGCCGCTTATGAGAAGGCGTATCCGGATCTG GCAGCCGAGTTTACCCGCCGGATGAGCGGCGGCCTGCCGGAAGCCTGGGAAGAGACGACGCAAAAGTTCATCAACGAGCT GCAGGCGAACCCGGCGAAAATCGCCACCCGTAAGGCATCGCAAAATACCCTTAACGCCTATGGCCCGCTGCTGCCGGAGC TGTTAGGCGGCTCAGCGGACCTGGCGCCAAGCAACCTGACCATCTGGAAAGGCTCCACTTCGCTGAAAGAGGATCCGGCG GGAAATTATATTCACTATGGGGTGCGCGAATTCGGCATGACCGCCATCGCCAACGGCATTGCCCATCATGGCGGATTTGT CCCCTACACCGCCACCTTCCTGATGTTCGTCGAGTACGCGCGTAACGCCGCGCGCATGGCGGCGCTGATGAAGGCGCGGC AGATTATGGTCTATACCCACGACTCGATTGGCTTGGGTGAAGATGGTCCGACTCATCAGGCGGTGGAGCAACTGGCCAGC CTGCGCCTGACGCCCAATTTCAGCACCTGGCGACCGTGCGATCAGGTTGAAGCGGCGGTCGGCTGGAAGCTGGCGGTGGA ACGGCATAACGGCCCGACGGCGCTGATTCTCTCGCGGCAGAATCTGGCGCAGGTGGAACGCACTCCGGAGCAGGTCAAAG AGATTGCCCGCGGCGGGTATATTCTGAAAGACAGCGGCGGCAAGCCGGATATCATTCTGATCGCCACCGGGTCGGAAATG GAGATCACCCTGCAGGCGGCGGAAAAACTGACCGGCGAAGGCCGCAACGTGCGGGTGGTTTCTCTGCCCTCTACCGATAT TTTCGACGCGCAGGACGACGCATACCGCGAGTCGGTACTGCCGTCGAACGTGACGGCGCGCGTGGCGGTGGAAGCGGGAA TCGCCGATTACTGGTACAAATACGTGGGCCTGAAAGGCGCGATTGTCGGAATGACGGGATACGGCGAGTCAGCGCCAGCG GACAAACTGTTCCCTTATTTCGGCTTTACGGTGGAGAATATCGTTGAAAAAGCGCATAAGGTGTTGAACGTGTAA Protein sequence : MSRKELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYD LPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPEHEIVDHYTYVFMGDGCLMEG ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTARRFEAYHWHVVHEIDGHDPQAIKKAIEEAQSVTDKPSLI ICRTVIGFGSPNKAGKEESHGAALGEEEVALTRQKLGWHHPAFEIPKEIYRAWDAREKGEKAQQSWQEKFAAYEKAYPDL AAEFTRRMSGGLPEAWEETTQKFINELQANPAKIATRKASQNTLNAYGPLLPELLGGSADLAPSNLTIWKGSTSLKEDPA GNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPEQVKEIARGGYILKDSGGKPDIILIATGSEM EITLQAAEKLTGEGRNVRVVSLPSTDIFDAQDDAYRESVLPSNVTARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPA DKLFPYFGFTVENIVEKAHKVLNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 75 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
