Gene Information

Name : ROD_23421 (ROD_23421)
Accession : YP_003365887.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Resistance
Product : membrane transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 2457502 - 2458749 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGTAACTCCCTCATCTTCTGCTGTCGCGACGGAAAACAGCGTCGCCAGCGTTATCCGCGCGCCGCGCCTGCTGGT
ACGCGAAACGCTGGCCGGGGTGATCACCGCGCTGGCGCTGATCCCGGAAGTGATCTCCTTTTCCGTTATCGCCGGGGTTG
ACCCGAAAGTCAGCCTGATCGCGTCAGTAGTGTTGTGCCTGGCGATGTCGCTGCTCGGCGGCCGTCCGGCGATGGTCACC
GCCGCCGCAGGCTCCGTCGCGCTGGTAATAGGCCCGATGGTCCATCAACACGGCGTGGAATACATCCTGCCTGCGGTGGT
GCTGGCCGGCGTGATTCAGATCCTGTTTGGCGTGACCGGAATGGCGCGCCTGATGCGCTTTATTCCGTCCGCGGTAATGA
CCGGTTTCGTCAACGCCCTCGGCATTCTGATTTTCTTTGCCCAGGTGCCGCATTTCTGGAGCAAAAGTCCGCTCATCTGG
GGCCTGTTCGCGCTGACCCTACTGATTGTGCTGTGGGCGCCGCGCTTTATTAAAAGCGTTCCCGCGCCGCTGATCGCCAT
TGTGCTGCTGACGATGTTTACGGTGACGACCGGCCAGATCCTGCCGACGGTGGGCGATGAAGGCTCAATGAGCGGCGGGC
TGCCCGGACTGACGCAGCTGCTGGTGCCGCTCAATCTGCAGACGCTGACGATTATCTGGCCCTGCGCGCTGAGCATCGCC
TTCGTCGGCCTGATGGAGTCGCTGCTTACCGCGAAGCTGGTGGACGACCTGACCGTCACGCCATCAAATAAAAATCGTGA
AAGCGCGGGGCTGGGCATCGCCAATATCTGCGCCGGTTTTTATGGCGGCATTGCCGGTTGCGCGATGATCGGCCAGACCA
TCGTCAACGTTGAAATGGGCAAAGGACGCAGCCGCGTATCGACTATCGCTGCAGGCGTGGTGCTGTTGCTGCTGGTCACC
GCCCTGAGCGAAGTGATGGCGAAAATCCCGATGTCGGTGCTGGCGGGGATTATGGTGATTGTGGCGGTTAAGACCTTCAG
CTGGCACAGCGTTCAGCCGGCCACGCTGACGAAACTGCCGCTTGCGGAAACGCTGGTGATGCTGATCACCGTTGGCGCAA
CGGTATCTACTGGCAACCTGGCGATTGGCGTGGTTGCCGGGGTCATCGCGATGGGCCTGCTTCCGCGGGTTATCCGGCGC
AAGCCGCGCGCTACAGCAGAAACAGCGTCGCCAGTCCAAGAAAAATAA

Protein sequence : 
MSVTPSSSAVATENSVASVIRAPRLLVRETLAGVITALALIPEVISFSVIAGVDPKVSLIASVVLCLAMSLLGGRPAMVT
AAAGSVALVIGPMVHQHGVEYILPAVVLAGVIQILFGVTGMARLMRFIPSAVMTGFVNALGILIFFAQVPHFWSKSPLIW
GLFALTLLIVLWAPRFIKSVPAPLIAIVLLTMFTVTTGQILPTVGDEGSMSGGLPGLTQLLVPLNLQTLTIIWPCALSIA
FVGLMESLLTAKLVDDLTVTPSNKNRESAGLGIANICAGFYGGIAGCAMIGQTIVNVEMGKGRSRVSTIAAGVVLLLLVT
ALSEVMAKIPMSVLAGIMVIVAVKTFSWHSVQPATLTKLPLAETLVMLITVGATVSTGNLAIGVVAGVIAMGLLPRVIRR
KPRATAETASPVQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 4e-65 48
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 4e-65 48
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 6e-65 48
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 6e-65 48
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 6e-65 48
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 6e-65 48
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 6e-65 48
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 6e-65 48
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 1e-59 48
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 6e-65 48
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 1e-59 48
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 6e-65 48
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 4e-65 48
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 6e-65 48
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 1e-59 48
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 4e-65 48
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 6e-65 48
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 1e-59 48
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 3e-65 47