|
Name : ROD_23111 (ROD_23111) Accession : YP_003365857.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2430014 - 2431603 bp Length : 1590 bp Strand : + Note : - DNA sequence : ATGACGCAACCGTTACTGTCGATAGACCAGCTCACCCTCGGCTTTCGCCGGCAAGGGCACGTTCGCACGGTAGTGAACGA CATTACGCTGACGGTCAACGCTGGCGAAACGCTGGCGCTGGTCGGCGAATCGGGTTCCGGCAAAAGCGTCACGGCGCTGT CGATCCTGCGGCTGTTGCCCTCCCCGCCGGCAGTTTACCTTGCCGGCGATATCCGCTTTCACGGCGAGTCGCTGCTTCAC GCCAGTGAACAGACGCTTCGCGGCGTGCGCGGCGACAAAATCGCCATGATCTTCCAGGAACCGATGGTTTCGCTTAATCC GCTCCACAATCTGGAAAAACAGCTTTATGAGGTGCTTTCGCTGCACCGGGGAATGCGGCGGGAAGCGGCCCGCGCCGAGA TCGTAAGCTGCCTCGATCGCGTCGGCATTCGCCAGGCGGCGAAACGGCTGGGTGATTATCCGCATCAGCTGTCCGGGGGC GAACGCCAGCGCGTCATGATTGCGATGGCGCTTCTGACGCGACCGGAGCTGCTGATTGCCGATGAGCCGACCACCGCGCT GGACGTTTCCGTCCAGGCGCAGATCCTGCAACTGCTGCGTGAACTTCAGCGCGAGCTGAACATGGGAATGCTGTTTATTA CCCATAACCTGAGTATCGTGAGAAAGCTGGCCGACAGCGTGGCGGTGATGCAAAACGGTCGCTGCGTCGAGCAAAACCGC GCAGACAGACTTCTTCATGCCCCCGCCCACCCTTACAGCCAGAAATTGCTTAACAGCGAACCTGCGGGCGATCCCGTACC GCTCTCCTCCGACCGCCCACCGCTGCTCAGGGTGGAAAATCTGCGCGTCGCCTTCCCGATTCGTAAAGGGATCCTCAAGC GGGTGGTGGCGAATAACGAAGTGGTTAAAGGGATCAGCTTCAGTCTGCGCCCCGGTGAAACGCTTGGGCTGGTAGGCGAG TCAGGTTCCGGCAAAAGTACCACCGGGCTTGCGCTGCTGCGCCTGATCTCATCGCAGGGCGGCATTGAATTTGACGGACA GCAGTTACAGCATCTCAGACGCCGTCAACTGTTGCCGGTGCGCCATCGCATTCAGGTAGTGTTTCAGGACCCGAACTCGT CGCTGAATCCCCGTCTGAGCGTGCTGCAAATCATTGAGGAAGGGCTGCGCGTGCACCAACCGTCCCTTACCGCCGAACAG CGTGAGCAGCAGGTGATGGCAGTGATGGCTGAGGTGGGGCTGGATGCAGAGACGCGACACCGCTATCCGGCGGAGTTTTC CGGCGGCCAGCGCCAGCGCATCGCAATTGCCCGCGCGCTGATCCTGAAGCCGTCACTGATTATTCTTGATGAGCCAACCT CGTCTCTCGACCGTACCGTGCAGGCGCAAATACTTGCGCTGCTGAAATCGCTACAGGCAAAGCATCAGCTGGCCTATATT TTCATAAGCCACGATCTGCACGTCGTACGCGCGTTATGCCATCAGGTGATTGTGCTGAGACAAGGAGAGGTCGTTGAGCA GGGACAGTGCGAGCATGTGTTTAACGCGCCGCAGCAGGCGTACACGCGTCAGCTTCTCGCGCTAAGCTGA Protein sequence : MTQPLLSIDQLTLGFRRQGHVRTVVNDITLTVNAGETLALVGESGSGKSVTALSILRLLPSPPAVYLAGDIRFHGESLLH ASEQTLRGVRGDKIAMIFQEPMVSLNPLHNLEKQLYEVLSLHRGMRREAARAEIVSCLDRVGIRQAAKRLGDYPHQLSGG ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQRELNMGMLFITHNLSIVRKLADSVAVMQNGRCVEQNR ADRLLHAPAHPYSQKLLNSEPAGDPVPLSSDRPPLLRVENLRVAFPIRKGILKRVVANNEVVKGISFSLRPGETLGLVGE SGSGKSTTGLALLRLISSQGGIEFDGQQLQHLRRRQLLPVRHRIQVVFQDPNSSLNPRLSVLQIIEEGLRVHQPSLTAEQ REQQVMAVMAEVGLDAETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDRTVQAQILALLKSLQAKHQLAYI FISHDLHVVRALCHQVIVLRQGEVVEQGQCEHVFNAPQQAYTRQLLALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 9e-86 | 41 |
