Gene Information

Name : ROD_22421 (ROD_22421)
Accession : YP_003365791.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 2352921 - 2353868 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGAATTTAACCACGTGAGTAAAACCTTCGGGCAGCAGAGAGCGGTTAACGATCTTAATCTGCATTTTAAAGAGGG
CAGTTTTTCGGTGCTGATTGGCACCTCCGGCTCCGGCAAATCCACTACTCTGAAAATGATTAACCGGCTGGTGGAGCATG
ACAGCGGGCAGATCCGCGTCGCCGGAGAGGAGATCCGCAGCCTGCCGCTGCTGGAACTGCGTCGGCGTATGGGATACGCC
ATTCAGTCGATCGGTCTGTTTCCGCACTGGACGGTCGCGCAGAACATCGCCACCGTGCCGCAGCTGCTGAAATGGCCGCG
CAAAAAAAGCGACGCGCGAGTGGATGAACTGATGGCGCTGCTGGGGCTGGAGCCGGGACTGCGTGAGCGCTACCCGCATC
AGCTCTCCGGCGGGCAGCAGCAGCGGGTGGGGGTGGCGCGCGCGCTGGCCGCCGATCCGCAGGTGCTGTTAATGGATGAA
CCTTTCGGCGCGCTGGATCCGGTCACCCGCGGCGCGTTGCAGCAGGAGATGATCCGCATTCACCGGCTGCTTGGGCGAAC
GATTGTACTGGTGACGCATGATATCGACGAGGCGTTACGGCTGGCCGAACACATGGTGCTGATGGACGGCGGAGAGGTGA
TCCAGCAGGGAACGCCGCTGCAAATGCTGACCGCGCCGGCAAATGATTTTGTGCGTCAGTTTTTTGGCCGCAGCGAGCTG
GGCGTGCGCCTGCTGTCGCTGCGCAACGTGGCCGATTACGTTCGCCGCGACGAGCATCTTGACGGCGATGCGCTGAATGA
AGCGATGACGCTGCGCGACGCGCTCTCCGTTTTTGTTGCCCGTAACCGTGAGGTGCTGCCGGTGGTGAATCAGCACGGCG
TCGCCTGCGGTACGCTGCATTTTCGCGATCTGCTTTCGGAGACGCTGACGCATGAAACGACTGACTGA

Protein sequence : 
MIEFNHVSKTFGQQRAVNDLNLHFKEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGQIRVAGEEIRSLPLLELRRRMGYA
IQSIGLFPHWTVAQNIATVPQLLKWPRKKSDARVDELMALLGLEPGLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
PFGALDPVTRGALQQEMIRIHRLLGRTIVLVTHDIDEALRLAEHMVLMDGGEVIQQGTPLQMLTAPANDFVRQFFGRSEL
GVRLLSLRNVADYVRRDEHLDGDALNEAMTLRDALSVFVARNREVLPVVNQHGVACGTLHFRDLLSETLTHETTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-57 52
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-58 52