Gene Information

Name : ugd (ROD_21661)
Accession : YP_003365715.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 2261153 - 2262319 bp
Length : 1167 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATAACCATTTCCGGTACCGGGTATGTTGGCCTGTCAAATGGTCTGCTGATCGCACAGCACCATGAGGTTGTCGC
GCTGGACATCATCCCGTCGCGCGTCGAAATGTTAAACGATCGGATATCTCCGATTGTTGATAAAGAAATACAACAATTTT
TACAGTCCGAAGAAATAAAGTTTAAAGCGACATTAGACAAAGCTGAAGCCTATAAAAATGCTGATTATGTTATTATCGCG
ACCCCTACGGATTACGATCCTCACACCAACTATTTCAATACCTCAAGTGTAGAGGCAGTCATTGGGGATGTCATTGCCAT
TAACCCTGATGCGGTAATGGTTATTAAATCCACCGTCCCGGTTGGTTTCACTGCTGCCGTCAGCAAAAAATTTAATACAA
GTAATATTATTTTCTCCCCAGAGTTCCTGCGCGAAGGCAAAGCGCTGTACGATAACCTGCATCCTTCACGTATCGTCATT
GGGGAACAGTCAGCAAGAGCGGAACGGTTTGCTGCCTTATTACAGGAAGGCGCCATCAAGCAGGATATCCCGACGCTGTT
TACCGATTCAACAGAAGCAGAGGCAATTAAGCTTTTCGCTAATACCTACCTGGCCATGCGCGTTGCCTACTTTAATGAGC
TGGACAGCTATGCCGAGAGCTTAGGATTGAATACGCGCCAGATCATTGAAGGCGTTTGCCTGGACCCGCGCATTGGCAAT
CATTACAACAACCCCTCATTTGGCTATGGCGGCTATTGCTTGCCGAAAGACACCAAGCAGCTGCTGGCGAATTATCAGTC
AGTTCCCAACAATATTATCTCCGCGATTGTAGACGCTAACCGCACACGCAAAGATTTTATTGCCGAGGCCATTCTTGCAA
GAAAGCCGAAAGTTGTCGGTATATATCGTCTTATTATGAAGAGTGGTTCGGATAATTTCCGGGCGTCGTCTATTCAGGGA
ATTATGAAGCGCATTAAAGCGAAGGGCGTTGAAGTGGTCATTTATGAACCCGTTATGCAGGAAGAGACGTTTTTCAATTC
CCGTATTGAACGTGATTTAACCACTTTTAAACAGCAGGCTGATGTCATCATCTCTAATCGAATGGCAAATGAACTGCACG
ACGTGCGGGAAAAGGTTTATACCCGCGATCTGTTCGGTAGTGATTGA

Protein sequence : 
MKITISGTGYVGLSNGLLIAQHHEVVALDIIPSRVEMLNDRISPIVDKEIQQFLQSEEIKFKATLDKAEAYKNADYVIIA
TPTDYDPHTNYFNTSSVEAVIGDVIAINPDAVMVIKSTVPVGFTAAVSKKFNTSNIIFSPEFLREGKALYDNLHPSRIVI
GEQSARAERFAALLQEGAIKQDIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVDANRTRKDFIAEAILARKPKVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVVIYEPVMQEETFFNSRIERDLTTFKQQADVIISNRMANELHDVREKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_003365715.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 8e-103 54