Gene Information

Name : ROD_20691 (ROD_20691)
Accession : YP_003365622.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : DNA binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2170953 - 2171840 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGGAGTTCTGGAGCAGGAAATGAAGCGGCTGGCGCAGCAGGCAGGCGGCAGCCATAAGACCGTTCACGACCGCATTAA
GCTGGCGCAGCGGTTTTGTGAGCGCCTGGTACTGGCGCAGAATGTACAAATTCGGCGGGTGGAGCAGCTTAAGGCGCGGC
ATATTGAAGGCTATGTCCGTGAACGACTGGCGCAGGGCATCACGAAGCGTTCCCTGCAAAACGAGATGGCGGCGGTGCGT
TGCATTATGAAACAGGCCGGGCGTGACAGGCTGGCGCAGAGTGAGCGGCTGAATAACCGCTCGCTGGGATTGTCCGGCGC
ATCCCGCAATGGTACGAAGCAGGCTATCACGCCGGAGCACTATCGTGATGTGCTGGAGACGGCCCGCGCAAAAGATCCGG
GGATGGCGGCAGCGCTGGCACTGTCAAGATTGCTGGGGCTGCGTTCGCAGGAGGCGGTGCAAAGTGAGCAGTCGCTGAAA
ACGTGGCGGCAGGCACTGGAACGTGGTGATACCCGTTTAACCGTGGTGTTTGGCACTAAAGGAGGTCGCCCGCGTGAAAC
CGTTATTCTTGATGCTGGCGCTGTCAAAAAAGCGCTGGATAATGCGCTGGCAGTGGCAGAAGATCGCCACGGCAGGCTGA
TCGATAAACCAGACCTGAAAAGCGCGATGAAATACTGGCACAGTCAGGCGTCACGTCTCGGGTTAACTGGCGCATATTCT
CCGCACTCGTTGCGCTATGCGTGGGCGCAGGATGCCATTCGTCATTATCTGACGCAGGGATTCAGCGAGAAAGAGGCGCT
GGCGATGACGGCGATGGATTTAGGCCACGGCGACGGGCGCGGTCGGTATGTGGCGCAGGTTTACGGGCGAAGGGATGATG
CTGATTGA

Protein sequence :
MGVLEQEMKRLAQQAGGSHKTVHDRIKLAQRFCERLVLAQNVQIRRVEQLKARHIEGYVRERLAQGITKRSLQNEMAAVR
CIMKQAGRDRLAQSERLNNRSLGLSGASRNGTKQAITPEHYRDVLETARAKDPGMAAALALSRLLGLRSQEAVQSEQSLK
TWRQALERGDTRLTVVFGTKGGRPRETVILDAGAVKKALDNALAVAEDRHGRLIDKPDLKSAMKYWHSQASRLGLTGAYS
PHSLRYAWAQDAIRHYLTQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRRDDAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 7e-99 82
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 7e-99 82
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 1e-102 79
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 1e-102 79
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 7e-63 51
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 1e-56 51
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 4e-60 49
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-38 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 3e-47 43
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 3e-47 43