Gene Information

Name : ROD_20611 (ROD_20611)
Accession : YP_003365615.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2162691 - 2162930 bp
Length : 240 bp
Strand : -
Note : note the different N-terminal

DNA sequence :
ATGAAAAACAGTAATCAGATAAGTGCTACGAAAAATGAATATATCGCAAAACGATTTATCCGTGTTCCTGATGTTTTAAA
TAGGGTGGGGTTTAGTCGCACCACCTTATATGAGCGTATTAAGGAAGGAAACTTTCCAGACAGGGTAAAAATAGGACCGA
GGTGCGTAGCCTTTGTCGAAAGTGAGATAGATGAATGGATTGAAGCCACTATTCGGAACTCACGCCAGAACACAGCATAA

Protein sequence :
MKNSNQISATKNEYIAKRFIRVPDVLNRVGFSRTTLYERIKEGNFPDRVKIGPRCVAFVESEIDEWIEATIRNSRQNTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-09 47
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-09 47
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-09 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 6e-08 43
unnamed CAA21398.1 - Not tested HPI Protein 9e-08 43
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 6e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_20611 YP_003365615.1 hypothetical protein VFG1141 Protein 2e-09 47