Gene Information

Name : ROD_20061 (ROD_20061)
Accession : YP_003365562.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2114047 - 2115027 bp
Length : 981 bp
Strand : +
Note : -

DNA sequence :
ATGACGATTAAGAAGCTCGAAGGGGGGCAATATCAGGTGGATATTTACCCGCGTGGGCGTGAAGGCAAGCGCATACGCAG
ACGTTTCAAGAAAAAACAGGAAGCTATTCTGTTTGAGCGGTATGTGATGGCTAACGTCGAGAAAAAAGAATGGCTCGGCG
CAAGCACTGATCGCCGTACACTTGGGGAGTTGCTGGAAATCTGGTGGCTGTTGCATGGTCAGACCCTGGAGAACGGTGCA
ATCGAAAGACAACAACTGGAAAAGACAATCAGGGCGCTTGGTAATCCTGCCGTTAACCGACTTGATAAGCGTGAAATTGC
CAGGCATCGCGGTGAACGGCTTACAGATGGTATTAGCGCATCAACCATTAACCGTGATGTTTATCGTTTGTCCGGTATGT
TTACCGCATTGAGTAAGCTTGGAGAATTTCGCGTTGAAAATCCCTGTCATGGTTTGCAGCCGTTACGGGAGGCGCAGCCA
CCGATGACTTACCTTACAAAACAGGAAATCGCCCGATTGCTGGAATTTCTGGAAGGTGACAATCGCCGGGTAGCATTGCT
GTGTCTCAGTACCGGGGCGCGGTGGAATGAGGGAAGCACGCTGCGGGCGGAGCAGGTCAATCATGGACGTGTGACCTTTC
TGAAAACGAAGAACGGCAAAAAAAGGACGGTGCCGATTTCGGAAGCTCTGGAGCGGGAGATCAAAACCTGCGAGACGGGG
CCGTTGTTTGATGTGAATTATGCTCAGTTTCGTGAGCAATTACGGCGTGTAAAACCTGATTTACCGCGGGGGCAGTCAAC
GCATGTGCTTCGCCACACGTTCGCCAGTTGGTTCATGATGAACGGAGGAAACATTATTGCGCTTCAGCAAATTATGGGTC
ATGCCAGCATTAAACAGACGATGGTTTATGCGCATCTTGCACCGGATTTTCTCCAGCACGCGATTACGTTAAATCCGCTT
GGTGGAGGTCTGGGGATTTGA

Protein sequence :
MTIKKLEGGQYQVDIYPRGREGKRIRRRFKKKQEAILFERYVMANVEKKEWLGASTDRRTLGELLEIWWLLHGQTLENGA
IERQQLEKTIRALGNPAVNRLDKREIARHRGERLTDGISASTINRDVYRLSGMFTALSKLGEFRVENPCHGLQPLREAQP
PMTYLTKQEIARLLEFLEGDNRRVALLCLSTGARWNEGSTLRAEQVNHGRVTFLKTKNGKKRTVPISEALEREIKTCETG
PLFDVNYAQFREQLRRVKPDLPRGQSTHVLRHTFASWFMMNGGNIIALQQIMGHASIKQTMVYAHLAPDFLQHAITLNPL
GGGLGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 8e-51 43
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 8e-51 43