Gene Information

Name : ROD_19661 (ROD_19661)
Accession : YP_003365521.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : transposase B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2083759 - 2084598 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence :
GTGAATGAGTTAAGGCCGGAGTTCCCTCTTGTACGCCTGTTAAAAGCGGCAGGGCTGGCGAGAAGCACATTCTACTGGCA
ACTGGCCAGCGGTAAAAAACCAGACCAATATGCCGGTGATAAGAGGCAGATTTTAACGCTGTTCCATAAACACAAAGGAC
GGTATGAATACAGGCGGATCACGCTGGCGAGCCGCCGGGAAGGAAGCTTACTGAACCATAAAACGGTTCAGAGATTAATG
AAGGAGTCAGATTTAACCTGCTGTATCAGAAGGAGGAAATATAACTCTTACAGAGGCCGGTACGGGAAAGCTGCGGGTAA
TGTACTGAATCGGCAGTTCAGAGCGGATAAGCCCAACCAGAAGTGGGTAACAGATGTCACGGAATTTAAAATCAACGGAG
AAAAACGGTATCTGTCTCCGGCTCTGGATCTGTATAACGGAGAAATAGTTGCATATCAGATGGCGTCCCGTCCTCTGCTG
CCGATGGAGGATGATATGCTGTCGAAAGCGATATCGGTACTGGGCAAGGACGAATATCCGCCATTGCACTCAGATCAGAG
CTGGCAGTACCAGATGGCGCATTATCAGAAGCGGCAAAAGGAGGGGGGACTGAAACAGAGCATGTCCAGAAAGGGAAACT
GTCACGACAGTGCAGTAATGGAAAGCTTCTTCGGTACGCTGAAGTCTGAATGCTTTTACCTGTCGGACCATAAAAATATC
AGCGAGTTGCGCATGGCTATCGATGATTACATCCACTATTACAACCATGAAAGAATAAAACAGAAACTGAAAGGCCTGAG
TCCGGTAGAGTACCGGACTCAGGCCCTGATAGCCGCTTAA

Protein sequence :
MNELRPEFPLVRLLKAAGLARSTFYWQLASGKKPDQYAGDKRQILTLFHKHKGRYEYRRITLASRREGSLLNHKTVQRLM
KESDLTCCIRRRKYNSYRGRYGKAAGNVLNRQFRADKPNQKWVTDVTEFKINGEKRYLSPALDLYNGEIVAYQMASRPLL
PMEDDMLSKAISVLGKDEYPPLHSDQSWQYQMAHYQKRQKEGGLKQSMSRKGNCHDSAVMESFFGTLKSECFYLSDHKNI
SELRMAIDDYIHYYNHERIKQKLKGLSPVEYRTQALIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-77 55
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-64 52
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 7e-50 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 7e-50 48
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-50 47
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 1e-49 46