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Name : ROD_00181 (ROD_00181) Accession : YP_003363664.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : glycosyl hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1501 EC number : - Position : 22860 - 24899 bp Length : 2040 bp Strand : - Note : - DNA sequence : ATGTCGTTTATTAAGCACGATCCCCAACGTCTGGTCTGGCAACACAACGATCGCTATCTATGGATTGAAGCCTGGGGAGA AAATAGTCTGCGCGTGCGCAGTGGCCGCCATATGCCCGTTATGCGCAATGAAAACTGGGCGCTAACGGAAACACCGGTAG CCTCTGCTGCGCAGGTGACGTATGAAGAAAAACGCGCCACGTTGCAGAACGGAAAAATTACCGCTGTTGTTAACCAGCAG GGACAGGTGTCCTTTTACCGTCACCCGGACAAATGTCTGCTGCAGGAGTTCTGGCGCCTGCGCGGTGAAATTGGCGAAGA TGAATCGTCGCATGGTCAGTATGTCAGCGCCCTGAACCTGGAAGAGCGCGAATTCAGGCCCATTCCCGGCGGGAAATATA CGATTAAGGCCCGCTTTGAAGCCAATGAAGGGGAAAAACTCTACGGCATGGGGCAATACCAGCAGCCCAATCTGGATCTG AAAGGCTGTATGCTTGAGCTGGCGCAGCGTAATTCCCAGGCGTCAGTGCCCTTTTTATTATCCAGCCACGGCTACGGTTT TCTGTGGAATAACCCGGCGATAGGCCGCGTGATCTTCGCCAACAACGGAACGGAGTGGGAAGCCGCGGTCAGTGAACAGC TCGACTACTGGATCACCGCTGGCGATACGCCGGCGGAGATTAGCGAGGCATACGCCCGCGCGACCGGAACGCCGCCGATG ATGCCTGATTACGCCATGGGATTCTGGCAGTGCAAGCTACGCTATCGTAATCAACAGGAATTGCTGGAAGTGGCGCGGGA GTATAAACGCCGTAATTTACCGCTGTCGGTTATTGTGATCGACTTTTTCCACTGGCCGAACCAGGGCGACTGGACTTTTG ATCCGTGTGACTGGCCCGATCCAGACGCCATGATAGCGGAACTGAAGGCGATGGGAACGGAACTGATGGTTTCCTTCTGG CCGACGGTGGATAACCGGACTGAAAGCTACCGCGAGATGAAAGAACACGGCTGGCTGGTGCATACGGAGCGCGGCCTGCC GATTAATATGGATTTTCTTGGCAATACCACGTTCTTTGATGCCACCCATCCTGAAGCGCGCAACTATGTCTGGGGCAAAG CAAAACGCAATTACTACGATAAAGGCGTGAAGCTATTCTGGCTGGATGAAGCAGAGCCTGAATTCAGCGTCTACGACTAC GATAACTATCGTTACCACACGGGCCCGGTACTGGAAACGGGAAATATTTATCCGCGCATGTACGCCAGAACCTTCTTTGA TGGTATGCGGGCTGCCGGAGAGCAGCAAATTATCAACCTCCTGCGCTGCGCCTGGGCGGGTAGCCAGAAATATGGCGCGC TGGTCTGGTCCGGCGATATTCACTCCTCTTTCCGCTCATTACGCAACCAGTTTGCCGCTGGATTAAATATGGGGATTGCC GGTATTCCCTGGTGGACAACGGATATTGGCGGTTTTCACGGCGGAAACATTCACGATCCGGCATTTCATGAGTTGTTAAT CCGCTGGTTCCAGTGGGGAATATTCAGCCCGGTAATGCGACTACACGGTAATCGCGATCCGCAGATCCTGCCGGAACAGC CCTATCGCGAGGGTATTGCCCAATGTCCGACCGGCGCGCCGAATGAGATCTGGAGCTATGGCGAAGAGGTCTGCGAGGTA CTGACAGGCTGCCTGCAACTGCGCGAGTCATTGAAACCCTACATTAAGCAGATCATGCAGGAAACGCATGAGAAAAATAC GCCGGTGATGCGGACCCTGTTCTTTGAATTTCCTCATCAGCCAGAAAGCTGGGAGATTGACGATCAGTACTGTTTCGGAC CCGATTTACTGGTGGCCCCCGTCATGTATGCAGGCGCTCGCGAGCGTACCGTCTGGCTACCGGACGGCGACACCTGGATC GATCTCTGTACCCGGGAACGTTATCAGGGAGGACAAACGCGCCTTCACGCCGCGCCGCTGAACAGGATACCGGTGTTTAT CCGCGAAAAAGGGAAATATCGCCATCTGCTGCCCGTATAA Protein sequence : MSFIKHDPQRLVWQHNDRYLWIEAWGENSLRVRSGRHMPVMRNENWALTETPVASAAQVTYEEKRATLQNGKITAVVNQQ GQVSFYRHPDKCLLQEFWRLRGEIGEDESSHGQYVSALNLEEREFRPIPGGKYTIKARFEANEGEKLYGMGQYQQPNLDL KGCMLELAQRNSQASVPFLLSSHGYGFLWNNPAIGRVIFANNGTEWEAAVSEQLDYWITAGDTPAEISEAYARATGTPPM MPDYAMGFWQCKLRYRNQQELLEVAREYKRRNLPLSVIVIDFFHWPNQGDWTFDPCDWPDPDAMIAELKAMGTELMVSFW PTVDNRTESYREMKEHGWLVHTERGLPINMDFLGNTTFFDATHPEARNYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDY DNYRYHTGPVLETGNIYPRMYARTFFDGMRAAGEQQIINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA GIPWWTTDIGGFHGGNIHDPAFHELLIRWFQWGIFSPVMRLHGNRDPQILPEQPYREGIAQCPTGAPNEIWSYGEEVCEV LTGCLQLRESLKPYIKQIMQETHEKNTPVMRTLFFEFPHQPESWEIDDQYCFGPDLLVAPVMYAGARERTVWLPDGDTWI DLCTRERYQGGQTRLHAAPLNRIPVFIREKGKYRHLLPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0551 | NP_814321.1 | glycosyl hydrolase | Not tested | Not named | Protein | 1e-158 | 47 |
| ef0077 | AAM75281.1 | EF0077 | Not tested | Not named | Protein | 9e-159 | 47 |
