Gene Information

Name : tpx (ROD_16781)
Accession : YP_003365246.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1787882 - 1788388 bp
Length : 507 bp
Strand : +
Note : unknown EC_number=1.11.1.-.

DNA sequence : 
ATGTCACAAACCGTTCATTTCCAGGGCAACCCGGTTGCAGTCGCCAACGCCATTCCTCAGGCAGGTAGCAAGGCGCAGCC
TTTTACCCTCGTGGCAAAAGATCTGTCTGACGTCGCGCTCAGCCAGTTCGCTGGCAAACGTAAAGTGCTGAACATTTTTC
CAAGCATTGATACCGGCGTATGCGCAGCATCGGTACGTAAATTTAATCAACTGGCCACCGAACTGGAAAACACCGTGGTG
CTGTGCGTTTCCGCGGATCTGCCGTTCGCGCAGTCCCGTTTCTGCGGCGCGGAAGGTCTGAGCAATGTGATTACGCTTTC
CACCCTGCGTAACGCTGAGTTCCTGAAGAATTATGGCGTGGAAATCACCGAAGGCCCCCTGAAAGGCCTCGCCGCACGCG
CCGTTGTGGTGATTGATGAAAACGACAACGTCATTTTCAGTCAGCTGGTTGATGAAATTACCACCGAACCCGATTATGCT
GCGGCGCTGGACGTGCTGAAAGCGTAA

Protein sequence : 
MSQTVHFQGNPVAVANAIPQAGSKAQPFTLVAKDLSDVALSQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATELENTVV
LCVSADLPFAQSRFCGAEGLSNVITLSTLRNAEFLKNYGVEITEGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYA
AALDVLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-34 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-35 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003365246.1 thiol peroxidase VFG0087 Protein 3e-35 48