Gene Information

Name : pykF (ROD_13741)
Accession : YP_003364959.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : pyruvate kinase I
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1474713 - 1476125 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGACGAAAATTGTTTGCACCATCGGTCCGAAAACCGAATCCGAAGAGATGTTAACCAAAATGCTGGACGCGGG
CATGAACGTCATGCGTCTGAACTTCTCTCACGGCGACTATGCCGAACACGGTCAACGTATCCAGAACCTGCGCAACGTGA
TGAGCAAAACCGGCAAGAAAGCCGCGATTCTGCTGGATACCAAAGGTCCGGAAATCCGTACCATCAAACTGGAAGGCGGC
AACGACGTCTCTCTGAAAGCAGGCCAGACCTTCACTTTCACCACCGACAAATCAGTTGTCGGCAACAATGAAATCGTTGC
GGTAACCTATGAAGGCTTCACTTCCGACCTCTCCGTCGGCAATACCGTTCTGGTCGACGACGGCCTGATCGGCATGGAAG
TCACCGCCATCGAAGGCGACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGCGTTAACCTG
CCTGGCGTCTCTATCGCCCTGCCGGCGCTGGCTGAAAAAGACAAACAGGATCTGATCTTCGGCTGCGAGCAAGGCGTTGA
CTTCGTTGCGGCTTCCTTTATCCGTAAGCGTTCTGACGTGGTGGAAATCCGTGAACACCTGAAAGCGCACGGCGGCGAGA
ACATCCAGATCATCTCCAAGATTGAAAACCAGGAAGGCCTGAACAACTTCGACGAAATCCTCGAAGCGTCCGACGGCATC
ATGGTTGCCCGCGGCGACCTGGGCGTCGAGATCCCGGTAGAAGAAGTTATCTTCGCGCAGAAGATGATGATCGAAAAATG
TATCCGCGCGCGTAAAGTGGTGATCACCGCTACCCAGATGCTGGATTCCATGATCAAAAACCCGCGCCCGACCCGCGCTG
AAGCCGGCGACGTGGCGAACGCCATCCTTGACGGCACCGATGCGGTAATGCTGTCCGGCGAATCCGCGAAAGGTAAATAC
CCGCTGGAAGCCGTCTCCATCATGGCGACCATCTGCGAACGTACCGATCGCGTCATGTCCAGCCGCCTGGACTTCAACAA
CGACAGCCGCAAACTGCGCATCACCGAAGCCGTATGCCGTGGCGCAGTTGAAACCGCTGAGAAACTGGAAGCGCCGCTGA
TCGTTGTCGCCACCCAGGGCGGTAAATCCGCGCGCGCCGTACGTAAATACTTCCCGGACGCCACTATCCTGGCGCTGACC
ACCAACGAAGTCACCGCCCGTCAGCTGGTGCTGAGCAAAGGCGTTGTGGCGCAGATGGTGAAAGAGATTACCTCCACTGA
CGACTTCTACCGTCTGGGTAAAGAAGTTGCCCTGCAGAGCGGCCTGGCTCAGAAAGGCGACGTGGTGGTGATGGTTTCCG
GCGCGCTGGTGCCGAGCGGTACTACCAACACCGCCTCTGTTCACGTGCTGTAA

Protein sequence :
MKKTKIVCTIGPKTESEEMLTKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGG
NDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGDKVICKVLNNGDLGENKGVNL
PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVVEIREHLKAHGGENIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PLEAVSIMATICERTDRVMSSRLDFNNDSRKLRITEAVCRGAVETAEKLEAPLIVVATQGGKSARAVRKYFPDATILALT
TNEVTARQLVLSKGVVAQMVKEITSTDDFYRLGKEVALQSGLAQKGDVVVMVSGALVPSGTTNTASVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 99
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 99
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 99
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_003364959.1 pyruvate kinase I VFG0479 Protein 0.0 99