Gene Information

Name : ROD_12321 (ROD_12321)
Accession : YP_003364818.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : -
Position : 1334070 - 1334957 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTAAAAACCGGTTTCGCCGGACGGTGCTTATCGCCGCTACGATGATGCCCTTCGTTGTTGGCAGCGCATCGCTTTG
GGCGCAGGCGCAGCCAGACGCACAGCAGGTTCAGCAGAAGCTGGCGGCGCTGGAAAAACAATCGGGGGGGCGTCTGGGCG
TTGCGCTAATTAATACCGCCGATAATTCACAACTGCTGTACCGGGGTGACGAACGGTTCGCGATGTGCAGCACCAGTAAA
GTGATGGTCGCCGCCGCGGTGTTAAAACAAAGCGAAACCCGCCCCGCTATTTTGCAGCAAAAAATACCGATTAAAAAAGC
CGACCTGACGAACTGGAATCCGGTAACGGAAAAATATGTCGGCAAAGAGATGACGTTAGCTGAGCTAAGCGCAGCGACGC
TGCAATACAGCGACAATACCGCCATGAATAAACTGATTGCGCATCTGGGCGGTCCTGGCAAGGTCACGGCATTCGCACGC
TCGACGGGCGATACCACTTTCCGTCTGGATCGCCAGGAACCCGAGCTGAATACCGCCATTCCGGGTGATGAACGCGACAC
CTCCTCGCCGCGGGCGATGGCTGACAGCCTGCGTAACCTGACGCTGGGCGATGCGCTGGCCGACACGCAGCGTGCCCAGC
TGGTGGCATGGTTGAAAGGCAATACCACCGGCGGTCAAAGCATTCGCGCCGGCGTTCCCGCCCACTGGGTAGTTGGCGAT
AAAACCGGCGCCGGAGAGTATGGCACCACCAATGATATCGCGATTATCTGGCCGGAAAATCGCCCCCCGCTCATTCTGGT
GACCTATTTTACGCAGCGACAGCAGGATGCGAAATGGCGTAAGGACGTGCTTGCCGCCGCGGCGAAAATCGTTACGGAAG
GCCGTTAA

Protein sequence : 
MFKNRFRRTVLIAATMMPFVVGSASLWAQAQPDAQQVQQKLAALEKQSGGRLGVALINTADNSQLLYRGDERFAMCSTSK
VMVAAAVLKQSETRPAILQQKIPIKKADLTNWNPVTEKYVGKEMTLAELSAATLQYSDNTAMNKLIAHLGGPGKVTAFAR
STGDTTFRLDRQEPELNTAIPGDERDTSSPRAMADSLRNLTLGDALADTQRAQLVAWLKGNTTGGQSIRAGVPAHWVVGD
KTGAGEYGTTNDIAIIWPENRPPLILVTYFTQRQQDAKWRKDVLAAAAKIVTEGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaCTX-M2 ACF06162.1 beta-lactamase CTX-M2 Not tested Tn5036-like Protein 3e-94 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_12321 YP_003364818.1 beta-lactamase AY303807.gene.p01 Protein 2e-90 78
ROD_12321 YP_003364818.1 beta-lactamase DQ102702.1.gene1.p1 Protein 2e-94 71
ROD_12321 YP_003364818.1 beta-lactamase DQ125241.gene.p01 Protein 2e-94 71
ROD_12321 YP_003364818.1 beta-lactamase AF189721.1.gene1.p01 Protein 1e-95 71
ROD_12321 YP_003364818.1 beta-lactamase AJ567481.1.gene1.p01 Protein 3e-94 71
ROD_12321 YP_003364818.1 beta-lactamase GQ149243.1.gene1.p01 Protein 6e-94 71
ROD_12321 YP_003364818.1 beta-lactamase AJ416344.1.gene1.p01 Protein 1e-93 71
ROD_12321 YP_003364818.1 beta-lactamase GU127598.1.gene1.p1 Protein 2e-94 71
ROD_12321 YP_003364818.1 beta-lactamase EF374097.1.gene1.p01 Protein 3e-94 71
ROD_12321 YP_003364818.1 beta-lactamase X92507.1.gene1.p01 Protein 2e-94 71
ROD_12321 YP_003364818.1 beta-lactamase DQ408762.1.gene1.p1 Protein 2e-94 71
ROD_12321 YP_003364818.1 beta-lactamase GQ149244.1.gene1.p01 Protein 5e-94 71
ROD_12321 YP_003364818.1 beta-lactamase HM776707.1.gene1.p1 Protein 2e-93 71
ROD_12321 YP_003364818.1 beta-lactamase HM167760.1.gene1.p01 Protein 1e-92 70
ROD_12321 YP_003364818.1 beta-lactamase AB284167.2.gene1.p01 Protein 7e-94 70
ROD_12321 YP_003364818.1 beta-lactamase U95364.1.gene1.p01 Protein 2e-93 70
ROD_12321 YP_003364818.1 beta-lactamase GQ870432.1.gene1.p1 Protein 4e-92 70
ROD_12321 YP_003364818.1 beta-lactamase AY157676.1.gene1.p01 Protein 1e-92 70
ROD_12321 YP_003364818.1 beta-lactamase EU177100.1.gene1.p01 Protein 4e-94 70
ROD_12321 YP_003364818.1 beta-lactamase AY954516.1.gene1.p1 Protein 3e-92 70
ROD_12321 YP_003364818.1 beta-lactamase FJ214367.1.gene1.p1 Protein 1e-94 70
ROD_12321 YP_003364818.1 beta-lactamase AY649755.1.gene1.p01 Protein 6e-94 70
ROD_12321 YP_003364818.1 beta-lactamase AB205197.1.gene1.p01 Protein 1e-94 70
ROD_12321 YP_003364818.1 beta-lactamase AY750914.gene.p01 Protein 7e-95 70
ROD_12321 YP_003364818.1 beta-lactamase HQ913565.1.gene1.p01 Protein 5e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AJ704396.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY267213.1.gene1.p01 Protein 3e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AF174129.3.gene9.p01 Protein 4e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AF255298.1.gene1.p1 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase DQ023162.1.gene1.p1 Protein 2e-91 69
ROD_12321 YP_003364818.1 beta-lactamase AY143430.1.gene1.p01 Protein 8e-95 69
ROD_12321 YP_003364818.1 beta-lactamase HM803271.1.gene1.p01 Protein 3e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AF325134.1.gene1.p1 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase JF966749.1.gene1.p01 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase DQ810789.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY156923.1.gene1.p01 Protein 4e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AF252623.2.gene1.p01 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase EF426798.1.gene1.p1 Protein 3e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AF518567.2.gene4.p01 Protein 1e-91 69
ROD_12321 YP_003364818.1 beta-lactamase AY822595.1.gene1.p01 Protein 5e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY995206.gene.p01 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY238472.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AF252622.2.gene2.p01 Protein 2e-94 69
ROD_12321 YP_003364818.1 beta-lactamase FJ907381.1.gene1.p01 Protein 4e-94 69
ROD_12321 YP_003364818.1 beta-lactamase FJ214368.1.gene1.p1 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY847145.1.gene1.p01 Protein 3e-93 69
ROD_12321 YP_003364818.1 beta-lactamase FJ214366.1.gene1.p1 Protein 2e-94 69
ROD_12321 YP_003364818.1 beta-lactamase DQ211987.1.gene1.p01 Protein 9e-94 69
ROD_12321 YP_003364818.1 beta-lactamase DQ256091.1.gene1.p1 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase EF418608.1.gene1.p01 Protein 1e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY847147.1.gene1.p01 Protein 3e-94 69
ROD_12321 YP_003364818.1 beta-lactamase EU202673.2.gene1.p2 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase EU402393.1.gene1.p1 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase HQ166709.1.gene1.p01 Protein 3e-93 69
ROD_12321 YP_003364818.1 beta-lactamase FJ815436.1.gene1.p01 Protein 2e-92 69
ROD_12321 YP_003364818.1 beta-lactamase Y10278.1.gene1.p01 Protein 5e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY080894.1.gene1.p01 Protein 7e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AB177384.1.gene1.p01 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase EU545409.1.gene1.p1 Protein 5e-93 69
ROD_12321 YP_003364818.1 beta-lactamase Y14156.1.gene1.p01 Protein 9e-91 69
ROD_12321 YP_003364818.1 beta-lactamase HQ833652.1.gene1.p01 Protein 3e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY292654.1.gene1.p1 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase FJ214369.1.gene1.p1 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase FJ873739.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY847144.1.gene1.p01 Protein 2e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AJ416345.gene.p01 Protein 4e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY598759.gene.p01 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AJ549244.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY847148.1.gene1.p01 Protein 4e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AJ005045.gene.p01 Protein 2e-91 69
ROD_12321 YP_003364818.1 beta-lactamase AM982522.2.gene1.p01 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY029068.1.gene1.p1 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase DQ885477.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY515297.1.gene1.p1 Protein 9e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY033516.1.gene2.p01 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase HQ833651.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase HQ398214.1.gene1.p01 Protein 3e-93 69
ROD_12321 YP_003364818.1 beta-lactamase FJ971899.1.gene1.p1 Protein 4e-92 69
ROD_12321 YP_003364818.1 beta-lactamase JF274243.1.gene1.p01 Protein 9e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AY847143.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AF325133.1.gene1.p1 Protein 2e-94 69
ROD_12321 YP_003364818.1 beta-lactamase JF274246.1.gene1.p01 Protein 3e-94 69
ROD_12321 YP_003364818.1 beta-lactamase JF274247.1.gene1.p01 Protein 6e-94 69
ROD_12321 YP_003364818.1 beta-lactamase EF581888.1.gene1.p01 Protein 2e-94 69
ROD_12321 YP_003364818.1 beta-lactamase AF305837.gene.p01 Protein 5e-94 69
ROD_12321 YP_003364818.1 beta-lactamase HM755448.1.gene1.p01 Protein 9e-94 69
ROD_12321 YP_003364818.1 beta-lactamase HQ398215.1.gene1.p01 Protein 1e-93 69
ROD_12321 YP_003364818.1 beta-lactamase DQ061159.1.gene1.p01 Protein 2e-93 69
ROD_12321 YP_003364818.1 beta-lactamase JN227085.1.gene1.p01 Protein 6e-93 69
ROD_12321 YP_003364818.1 beta-lactamase AY847146.1.gene1.p01 Protein 3e-94 69
ROD_12321 YP_003364818.1 beta-lactamase JF274242.1.gene1.p01 Protein 7e-94 69
ROD_12321 YP_003364818.1 beta-lactamase DQ335136.gene.p01 Protein 4e-63 68
ROD_12321 YP_003364818.1 beta-lactamase AY005110.1.gene1.p1 Protein 2e-89 68
ROD_12321 YP_003364818.1 beta-lactamase DQ328639.gene.p01 Protein 1e-90 68
ROD_12321 YP_003364818.1 beta-lactamase EU136031.3.gene1.p3 Protein 2e-93 68
ROD_12321 YP_003364818.1 beta-lactamase AJ557142.gene.p01 Protein 5e-93 68
ROD_12321 YP_003364818.1 beta-lactamase DQ268764.2.gene6.p01 Protein 1e-92 68
ROD_12321 YP_003364818.1 beta-lactamase AM411407.1.gene1.p01 Protein 9e-94 68
ROD_12321 YP_003364818.1 beta-lactamase EF210159.1.gene1.p01 Protein 9e-93 68
ROD_12321 YP_003364818.1 beta-lactamase AF488377.1.gene1.p1 Protein 6e-93 68
ROD_12321 YP_003364818.1 beta-lactamase X92506.gene.p01 Protein 2e-93 68
ROD_12321 YP_003364818.1 beta-lactamase EF219142.1.gene1.p01 Protein 1e-93 68
ROD_12321 YP_003364818.1 beta-lactamase GQ351346.1.gene1.p01 Protein 7e-93 68
ROD_12321 YP_003364818.1 beta-lactamase DQ223685.1.gene1.p01 Protein 3e-93 68
ROD_12321 YP_003364818.1 beta-lactamase DQ663489.gene.p01 Protein 3e-88 67
ROD_12321 YP_003364818.1 beta-lactamase EU555534.1.gene1.p01 Protein 6e-60 56
ROD_12321 YP_003364818.1 beta-lactamase EU729727.1.gene1.p1 Protein 4e-60 56
ROD_12321 YP_003364818.1 beta-lactamase HM066995.1.gene1.p01 Protein 2e-59 56
ROD_12321 YP_003364818.1 beta-lactamase AF395881.gene.p01 Protein 1e-59 56
ROD_12321 YP_003364818.1 beta-lactamase GQ140348.1.gene1.p01 Protein 9e-60 56
ROD_12321 YP_003364818.1 beta-lactamase FJ234412.1.gene1.p01 Protein 5e-60 56
ROD_12321 YP_003364818.1 beta-lactamase AY034847.1.gene1.p01 Protein 9e-60 56
ROD_12321 YP_003364818.1 beta-lactamase AF297554.1.gene1.p1 Protein 2e-59 55
ROD_12321 YP_003364818.1 beta-lactamase HQ641421.1.gene1.p01 Protein 2e-59 55
ROD_12321 YP_003364818.1 beta-lactamase AF275256.gene.p01 Protein 8e-56 50
ROD_12321 YP_003364818.1 beta-lactamase Z28968.gene.p01 Protein 9e-54 50
ROD_12321 YP_003364818.1 beta-lactamase U50278.1.gene2.p01 Protein 1e-54 48
ROD_12321 YP_003364818.1 beta-lactamase AF367983.gene.p01 Protein 2e-47 46
ROD_12321 YP_003364818.1 beta-lactamase JF949915.1.gene1.p01 Protein 5e-36 43
ROD_12321 YP_003364818.1 beta-lactamase JF949916.1.gene1.p01 Protein 5e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AY130282.1.gene1.p1 Protein 2e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AB733453.1.gene1.p01 Protein 3e-36 43
ROD_12321 YP_003364818.1 beta-lactamase DQ322460.1.gene1.p1 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase DQ836922.1.gene1.p01 Protein 1e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AF467948.1.gene1.p1 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase DQ013287.1.gene1.p1 Protein 1e-35 43
ROD_12321 YP_003364818.1 beta-lactamase HQ661363.1.gene1.p1 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AY528718.1.gene1.p01 Protein 1e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AM176553.2.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AF208796.2.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AJ866285.2.gene1.p01 Protein 2e-36 43
ROD_12321 YP_003364818.1 beta-lactamase EU418913.1.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase EU032604.1.gene1.p01 Protein 1e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AY263404.1.gene1.p1 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase EU274581.1.gene1.p1 Protein 1e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AM176546.2.gene1.p01 Protein 4e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AF299299.1.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AB551737.1.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase AY327539.1.gene1.p01 Protein 2e-35 43
ROD_12321 YP_003364818.1 beta-lactamase EU274580.1.gene1.p1 Protein 9e-37 43
ROD_12321 YP_003364818.1 beta-lactamase AF427129.1.gene1.p01 Protein 1e-37 43
ROD_12321 YP_003364818.1 beta-lactamase AY307100.1.gene1.p1 Protein 2e-36 43
ROD_12321 YP_003364818.1 beta-lactamase EU815939.1.gene1.p1 Protein 1e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AF427128.1.gene1.p01 Protein 5e-37 43
ROD_12321 YP_003364818.1 beta-lactamase AF427130.1.gene1.p01 Protein 2e-36 43
ROD_12321 YP_003364818.1 beta-lactamase DQ834729.1.gene1.p1 Protein 1e-36 43
ROD_12321 YP_003364818.1 beta-lactamase EF534736.1.gene1.p01 Protein 9e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AF347054.1.gene1.p1 Protein 2e-36 43
ROD_12321 YP_003364818.1 beta-lactamase AY130284.1.gene1.p1 Protein 2e-36 42
ROD_12321 YP_003364818.1 beta-lactamase AY130285.1.gene1.p1 Protein 2e-36 42
ROD_12321 YP_003364818.1 beta-lactamase AY039040.1.gene1.p01 Protein 7e-36 42
ROD_12321 YP_003364818.1 beta-lactamase AY178993.1.gene1.p01 Protein 2e-39 42
ROD_12321 YP_003364818.1 beta-lactamase AF135373.1.gene1.p01 Protein 2e-39 42
ROD_12321 YP_003364818.1 beta-lactamase AJ239002.1.gene1.p01 Protein 4e-36 42
ROD_12321 YP_003364818.1 beta-lactamase AY037780.1.gene1.p01 Protein 9e-36 42
ROD_12321 YP_003364818.1 beta-lactamase DQ834728.1.gene1.p1 Protein 5e-36 42
ROD_12321 YP_003364818.1 beta-lactamase U14748.1.gene2.p01 Protein 4e-42 42