Gene Information

Name : ROD_11991 (ROD_11991)
Accession : YP_003364790.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1298192 - 1298935 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGATCTCTTCGACCCTGGTTTCATTTCACCATGTGCGTAAATCCTGGCAACAGGTGACGGCGTTACAGAACGTCAGTCT
TGATATTGCCGCCGGCGAGCTGGTGGCGCTGGTAGGCAGCAGCGGCTGTGGTAAATCAACGCTGCTGCGGATGCTGGTGG
GCCTTGAGTCGGTATCTCAGGGCGAGATCCGCATCAACGGCGAGCGGGTGACCGGCGTTGGCAAAGAGCGCGGCATTGTC
TTCCAGGAGCCGCGCCTGTTCCCCTGGCTTAAGGTTATCGACAACGTGATGCTCGGCCTGGCGGATGAAAAGCTCAGCCG
GGCGGAGAAACGTCAGCGGGCAGAGGAAATGCTGGCACGCGTACAGTTAACCGAGTTTGCTCACGCGCTGCCCGCTCAGC
TTTCCGGCGGTATGGCCCAGCGGGTGGCGATTGCTCGCGGTCTGGTTGCCCGCCCGCAGATTCTGATGCTGGATGAACCT
TTCAGCGCGCTGGATGCCCTGACGCGCCATACCCTGCAACAGGTACTGCTGCAAATCCACCGTAGCGCAGGAACCACCAC
CCTACTGGTAACGCACGATGTGGAAGAGGCGGTCGCGCTCGCCGATCGAGTCGTGGTGTTCTCACCACGTCCGGGGCGGA
TACGCGACATTGTCAGTCTGACGCTGCCCCATCCGCGCCAGCGCGACGATACCGCTTTTATCGCGGCCTGCCGGCAAATT
CGTAATCTGATTACTTCTGGCTGA

Protein sequence : 
MISSTLVSFHHVRKSWQQVTALQNVSLDIAAGELVALVGSSGCGKSTLLRMLVGLESVSQGEIRINGERVTGVGKERGIV
FQEPRLFPWLKVIDNVMLGLADEKLSRAEKRQRAEEMLARVQLTEFAHALPAQLSGGMAQRVAIARGLVARPQILMLDEP
FSALDALTRHTLQQVLLQIHRSAGTTTLLVTHDVEEAVALADRVVVFSPRPGRIRDIVSLTLPHPRQRDDTAFIAACRQI
RNLITSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-51 51
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_11991 YP_003364790.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-19 43