Gene Information

Name : ROD_10891 (ROD_10891)
Accession : -
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1193894 - 1194735 bp
Length : 842 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATATCACAATCTCCAGTCTGGAAGTGGTCAACGGGCATACGGATGTTATCTGCTCCACCAGTATCCGACACGT
TGTGACGGTACGGAATATAGCACTGCAACAAACCGAAGCGCTTATCCGGCAACTGGCAGAAAACTCAGCACTGACAGAAA
TGATTGGAGGTAAAACCGCCCTGGACTGGGCCGATGAAACAGGATTTTCGCTGTGGCTGCTGGCTGACGGAGAAACCTGA
AACCGCGATGAAAACCATCACCTGGAATCTCGACCGTGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGAGTC
TGATGGATGCACAGGACGGCGATACATGGCAGCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGTGAAGAGAATATC
CTGAGCAGATTTGAACAACTGCACCAGAGCAGGGATGAGGTGTTTGAGCGAGGGGGGGAGCAACGTTTTCAGGGGACTAA
GCTGGGATTACAAAACCAACACACCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGG
GGATTTCATCTTATCACCGGGCAACAGGCCGACCGACTTGCCGATCTGGAAAGAATACTGCATCTGTTCAGCAATAAACC
AGTCCCCGATTGCAGGGAAAACATCACCATTCATCTGGATGACCACATCCAGTCTGTTCAGGGTAAAGAGTGCTATGAAG
ATGAGATGTTCATCATTAAATATTTTAAGAAGGGCTCCGCGCATATCACGTTCAGGAAACCAGAACTGGTTGACAGATTG
AATGCTATTATCGCAAAACACTATCCTGACATGCTGCTAGTA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI DNA e-169 90.4
Z1664 NP_287166.1 hypothetical protein Not tested TAI DNA e-169 90.4
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 DNA e-204 89.9
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 DNA e-204 89.9
unnamed AAK00485.1 unknown Not tested SHI-1 DNA e-129 88.9
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 DNA e-129 88.9
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 DNA e-129 88.9
aec79 AAW51762.1 Aec79 Not tested AGI-3 DNA e-200 88
unnamed AAL57572.1 unknown Not tested LEE DNA 0.0 87.5
unnamed CAI43906.1 hypothetical protein Not tested LEE DNA 0.0 87.4
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 DNA e-196 87.3
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 DNA e-193 87.3
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE DNA e-192 86.8
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 DNA e-140 86.1
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE DNA e-175 84.9