Gene Information

Name : ROD_10871 (ROD_10871)
Accession : YP_003364694.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1193525 - 1193809 bp
Length : 285 bp
Strand : +
Note : -

DNA sequence :
ATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCCGGATGTCTGCCGGGCCTGCCCACTTTCGACTGGTAATCCGGAAAT
ACACAACATCAAATCATTAACCACGGAAATGGCGCTGGATATTCTGATTGCGTGGCTGCAGGACAATATCGACTGCGAAT
CTGGAATTATCTTCGACAACAATGGGGATAAAACGGATTCGGCAGCACTGCTGCCCTGTATTGAACAGACCTGGGAGGAT
ATCCGTACCCTGCGCCATCTGCAGCTTCTGCAGCAGAAGCGGTGA

Protein sequence :
MASVSFIWMPAPDVCRACPLSTGNPEIHNIKSLTTEMALDILIAWLQDNIDCESGIIFDNNGDKTDSAALLPCIEQTWED
IRTLRHLQLLQQKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 2e-21 86
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 1e-21 86
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 3e-21 86
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 6e-22 84
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 8e-22 84
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 8e-20 84
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_10871 YP_003364694.1 hypothetical protein VFG1532 Protein 5e-22 86
ROD_10871 YP_003364694.1 hypothetical protein VFG1684 Protein 3e-20 84
ROD_10871 YP_003364694.1 hypothetical protein VFG1622 Protein 8e-22 83