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Name : serS (ROD_09571) Accession : YP_003364580.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1050243 - 1051535 bp Length : 1293 bp Strand : + Note : - DNA sequence : ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAGCTGCGCGCTCTTGAAGAGCGTCGTAAGGTCTTGCAGGTTAATACGGAAAACCTGCAGGCAGAGCGTAATTCTC GATCGAAATCCATCGGCCAGGCGAAAGCGCGCGGGGAAGATATTGAGCCTTTACGCTTGGAAGTTAACAAGCTGGGCGAG GAGCTGGATGCGGCGAAAGCCGAGCTGGATGTACTGCAGGCTGAGATCCGCGACATCGCGCTGACCATTCCTAATCTGCC TGCTGACGATGTGCCGGTGGGAAAAGACGAGAACGACAACGTTGAAGTCAGCCGTTGGGGAACGCCCCGTCAGTTTGATT TCGAAGTCCGCGATCACGTGACGCTGGGCGAAATGCATACCGGCCTTGATTTTGCCGCCGCCGTGAAGCTGACGGGCTCT CGTTTTGTGGTGATGAAAGGGCAGATTGCCCGGATGCATCGCGCTCTTTCCCAGTTCATGCTGGATCTGCACACGGAGCA GCATGGCTACAGCGAAAATTACGTTCCGTACCTGGTCAACCATGACACCCTGTACGGCACCGGTCAGTTGCCGAAATTCG CCGGCGATCTGTTCCATACCCGTCCGCTCGAAGAAGAAGCCGACAGCAGCAATTATGCGCTGATCCCGACGGCGGAAGTG CCGCTGACCAACCTGGTACGCGACGAGATCATTGACGAAGATCTGCTGCCGATCAAAATGACTGCGCATACGCCATGCTT CCGTTCTGAAGCCGGTTCGTATGGCCGCGATACCCGTGGCCTGATTCGTATGCACCAGTTCGACAAAGTGGAAATGGTGC AGATCGTTCGTCCGGAAGATTCAATGGCGGCTCTGGAAGAGATGACCGGTCACGCCGAGAAAGTATTACAGCTGCTGGGC CTGCCGTACCGCAAGATTGTTTTGTGCACCGGCGACATGGGCTTTGGCGCCTGCAAAACTTACGATCTGGAAGTATGGAT CCCGGCGCAGAATACCTATCGTGAAATTTCCTCCTGCTCGAACGTCTGGGATTTCCAGGCGCGCCGTATGCAGGCTCGCT GCCGCAGCAAGTCCGACAAGAAGACCCGTCTGGTTCACACCCTGAACGGTTCTGGTCTGGCGGTGGGACGTACGCTGGTT GCGGTGATGGAAAACTATCAGCAGGCGGATGGCCGTATTGAGGTGCCGGAAGTGCTGCGTCCGTATATGAACGGACTGGA ATACATTGGCTGA Protein sequence : MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGE ELDAAKAELDVLQAEIRDIALTIPNLPADDVPVGKDENDNVEVSRWGTPRQFDFEVRDHVTLGEMHTGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDLLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKIVLCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV AVMENYQQADGRIEVPEVLRPYMNGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-107 | 57 |
