Gene Information

Name : RMDY18_07210 (RMDY18_07210)
Accession : YP_003362373.1
Strain : Rothia mucilaginosa DY-18
Genome accession: NC_013715
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 765949 - 767373 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
ATGTTTACCAGCCCCCAGGAAGTTCTCGACTTTATCAAGAACGAAGAAGTAGTCTTCGTTGATATCCGATTCACCGACAT
GCCCGGCGTGCAGCAGCACTTCAACCTGCCCGCTAAGGCGATTGATGACGATTTCTTCGTCAACGGCCAGCTTTTTGATG
GCTCCTCCATTCGCGGCTTCCAGGGCATTGCAGAGTCCGACATGCAGCTGATTCCTGACGTTCAGTCCGCGTACGTTGAC
CCCTTCCGCATTGAGAAGACCCTGGTCATCATCTGCTCCATCGTGAACCCCCGCACCGGCGAGCCCTACCACCGTGACCC
CCGCGGCGTCGCTGAGCGTGCCGAGGCATACCTGCAGTCCACCGGCATTGCAGACACCGCGTTCTTCGCATCCGAGGCTG
AATTCTTCGTCTTCGAGGACGTCCGCTACCAGGTCGAGCCGAACTCCGTGTTCTACAAGATCGACTCCGATGAGGCTCCC
TGGAACACCGGCCGCAAGGAAGAGGGCGGCAACCTGGGCAACAAGACCCCCGTCAAGGGCGGCTACTTCCCCGTCTCCCC
CGTCGACAAGCAGGCTGACCTGCGTGACGCAATGTGCGTAGCAATGGACGAGGTTGGCCTTGAGGTTGAGCGTAGCCACC
ACGAGGTGGGCGCAGCCGGCCAGGCAGAAATCAACTACAAGTTCGACACCCTCACCAAGGCTGCTGACGACCTGCTGAAG
TTCAAGTACGTCATCAAGGGCACCGCAGACGCATGGGGCAAGTCCGTAACCTTCATGCCTAAGCCCGTGTTCGGTGACAA
CGGCTCCGGCATGCACTGCCACCAGTCGCTGTGGCAGGACGGCGAGCCCCTCTTCTACGATGAGCGCGGCTACGCTAACC
TCTCTGACACCGCCCGCTGGTACATTGGCGGTCTGATTGAGCACTCCTCCGCTGTTCTGGCGTTCACCAACCCGACCGTG
AACTCGTACAAGCGTCTGGTTCCCGGCTACGAGGCTCCCATCAACATGGTGTACTCGCAGGGTAACCGTTCCGCTGGTAT
CCGCATCCCGATTACCGGCACCAACCCGAAGGCCAAGCGTCTGGAGTTCCGCGCACCGGACCCCTCCGCTAACCCCTACT
TCGCGTTCGCTGCTCAGCTGATGGCTGGTCTGGACGGTATCCGTAACCGCATTGAGTCGCCGGCACCGATCGATAAGGAC
CTGTACGAGCTACCCGCTGAAGAGGCTAAGGACATCAAGAAGGCTCCGGCTAACCTGGAGGAGGCGCTGGCTGCTCTGGA
GGCTGACCACGACTTCCTGCTCGAGGGCGGCGTCTTCACCGAGGACCTGATTCAGGCGTGGATTGACTACAAGCGTAAGA
ACGAGCTGGAGCCGCTCTCGCTGGTTCCGCACCCGCTTGAGTACCAGCTGTACTACGGCGTCTAA

Protein sequence :
MFTSPQEVLDFIKNEEVVFVDIRFTDMPGVQQHFNLPAKAIDDDFFVNGQLFDGSSIRGFQGIAESDMQLIPDVQSAYVD
PFRIEKTLVIICSIVNPRTGEPYHRDPRGVAERAEAYLQSTGIADTAFFASEAEFFVFEDVRYQVEPNSVFYKIDSDEAP
WNTGRKEEGGNLGNKTPVKGGYFPVSPVDKQADLRDAMCVAMDEVGLEVERSHHEVGAAGQAEINYKFDTLTKAADDLLK
FKYVIKGTADAWGKSVTFMPKPVFGDNGSGMHCHQSLWQDGEPLFYDERGYANLSDTARWYIGGLIEHSSAVLAFTNPTV
NSYKRLVPGYEAPINMVYSQGNRSAGIRIPITGTNPKAKRLEFRAPDPSANPYFAFAAQLMAGLDGIRNRIESPAPIDKD
LYELPAEEAKDIKKAPANLEEALAALEADHDFLLEGGVFTEDLIQAWIDYKRKNELEPLSLVPHPLEYQLYYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-79 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMDY18_07210 YP_003362373.1 glutamine synthetase VFG1399 Protein 7e-129 61