Gene Information

Name : RMDY18_05800 (RMDY18_05800)
Accession : YP_003362232.1
Strain : Rothia mucilaginosa DY-18
Genome accession: NC_013715
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 602182 - 602682 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGAAGTAACTCTACAGAACGAACTCGTAATCCACACCAACGGCGACCTGCCCGCAGTCGGCGCAAAGCTGCCCGA
ATTTTCGGTTCTCGCGGCTGATCTCTCCGAGATTTCCTCCGCAGATTTCGCAGGTAAGAACCTGGTGCTGAACATCTTCC
CCTCCGTCGACACCAGTGTTTGCGCAACCAGCGTCCGCACTTTCAACAAGCAGGCTGCAGGCCTGGAGAACACCGTCGTG
CTGTGCGTCTCCAACGACCTGCCCTTCGCAATCGGCCGCTTCTGCGCAGCCGAGGGCATTGAAAACGTCGTCACCTCCTC
CGCTTTCCGCTCCTCCTTCGGTGAGGACTTCGGCGTGAAGCTGATTGACGGCCCCCTGGCGGGTCTGCTGGCACGCTCTG
TGGTCGTCGTGAACCCCGCCGGTGAGGTTGTCTACACCGAGCTGGTCCCCGAAACCACCAACGAGCCCAACTACGAAGCA
GCCCTGGCAGCTATCAAGTAA

Protein sequence : 
MAEVTLQNELVIHTNGDLPAVGAKLPEFSVLAADLSEISSADFAGKNLVLNIFPSVDTSVCATSVRTFNKQAAGLENTVV
LCVSNDLPFAIGRFCAAEGIENVVTSSAFRSSFGEDFGVKLIDGPLAGLLARSVVVVNPAGEVVYTELVPETTNEPNYEA
ALAAIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-34 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-34 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 5e-34 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMDY18_05800 YP_003362232.1 peroxiredoxin VFG0087 Protein 7e-35 46