Gene Information

Name : RMDY18_18720 (RMDY18_18720)
Accession : YP_003363524.1
Strain : Rothia mucilaginosa DY-18
Genome accession: NC_013715
Putative virulence/resistance : Virulence
Product : enterobactin ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 2098072 - 2099250 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCGGGTCCGGCTCACGTGTCGGAGCACGGTCCGCATCGTGCTCAGCGCCCTGTTGCGCGTGGTTCGTCTGGTTCG
ACTGGCGTATCTGGTTTGTAGGCCCCGGTTTCTGAGAGGTTTTATTGTGAGCGTTGTGTCTCGTTCTGTAGCCGGGTCTG
CTGTTGCCGGGTCTGTGCGTATCCCGGGGCGTTACCGCACCCCTATTCCGCGTACCCTGCTGGTGGTGGCGGTGCTTGTG
GTGGCGGCGGTCGCCTCCCTGGTGTTTGGTAGTTATCAGATGAGCCCTGATCAGGTGTTTCGCCTGATTTTTCAGGGTGC
GGGCACGGAGATTGAGCGTCAGCTGGTGTTGAATCAGCGTCTGCCGCGTATGCTTGCCGCCGTGGTGGTGGGTGCGGCTT
TGGGCTTATCGGGCGCTATTTTTCAGTCGGTTTCCCGTAATGCGCTGGGTTCGCCGGATATTATCGGCTTCACGGTGGGT
TCGGCGACCGGTGCCCTGTCTGTGGTGCTGATTGGGTCGTTGAGTTCTACCGGCGTGGGTATGGGCCTGGGCGCTATTAT
TGGCGGTTTTGCGACGGCGGCTGTGGTGATGCTTCTGGCGGGTGTGCGCGGTGGTGCAACGATGGGTCAGAAAATGGTGC
TGATTGGTATTGCGGTGAGTGCGATGCTCAGTTCCGTGAATGATTACCTGATTACGCGCGGTGATTTGGAGAAGGCGGAG
GCGGCGAAGACCTGGCAACACGGTTCGCTAAATGCCCTGTCGTGGAACCAGATGTCGGTGCAGGCGGTGCTGCTGCTGGT
GGCGATTCCGCTGGTGCTGATGCTGACGCATCGCCTGCGCGTCTTGGAGCTCGGCGACGATTTGGCGGCGGGTTTGGGCC
TGCCGGTGAAGAGGACCGTGAACATGCTGGTGGCGGCTGCCGTGCTCCTGGTGGCTGTGGCGATTTCTGTTGCGGGCCCG
ATTGGTTTCTTGGCGCTGGTTGCCCCGCAGATTGCGCGCCGCCTGTGGAACACTCCGGGTATGGCGATGTGGCATTCGGC
GTTGCTGGGTTCGGTGATTTTGGTGCTGGCTGATTTTGTGTCGGCTCGTGCGTTGGCGCCGTTCCAGATTCCGGTGGGTC
TGGTGACGGGTGCGTTGGGTGGCGTGTACATGCTGTGGTTGCTGTACCGTCAGCGCTAG

Protein sequence :
MSRVRLTCRSTVRIVLSALLRVVRLVRLAYLVCRPRFLRGFIVSVVSRSVAGSAVAGSVRIPGRYRTPIPRTLLVVAVLV
VAAVASLVFGSYQMSPDQVFRLIFQGAGTEIERQLVLNQRLPRMLAAVVVGAALGLSGAIFQSVSRNALGSPDIIGFTVG
SATGALSVVLIGSLSSTGVGMGLGAIIGGFATAAVVMLLAGVRGGATMGQKMVLIGIAVSAMLSSVNDYLITRGDLEKAE
AAKTWQHGSLNALSWNQMSVQAVLLLVAIPLVLMLTHRLRVLELGDDLAAGLGLPVKRTVNMLVAAAVLLVAVAISVAGP
IGFLALVAPQIARRLWNTPGMAMWHSALLGSVILVLADFVSARALAPFQIPVGLVTGALGGVYMLWLLYRQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-26 44
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 6e-27 44
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 6e-27 44
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 6e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMDY18_18720 YP_003363524.1 enterobactin ABC transporter permease VFG0928 Protein 5e-20 41