|
Name : RMDY18_18710 (RMDY18_18710) Accession : YP_003363523.1 Strain : Rothia mucilaginosa DY-18 Genome accession: NC_013715 Putative virulence/resistance : Virulence Product : Fe3+-siderophore ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 2096901 - 2098172 bp Length : 1272 bp Strand : + Note : - DNA sequence : ATGACACCACAGACCTCCCCCTCTTCCGGACCCGCCGTTAGCGCTGCTTCCCTGGCGAAAATTCGTGCCCTCTCCGCTTC TTCGGACGCCGTATCTGGCGCCTCCTCTGGCGGTCAGGGTGGCAAGTCTATCTCGCGTCTGGCGGTTGCGCTCATTATTG GCGGCGTTCTGCTAGTGCTGCTTTGCGCCCTGTCGTTTACGGTGGGTTCGCGCCTGTTCACCCTGGACCGCTCGATTGAC GGTTTCCTCCACCCGGAGGCGAACACCATCGAGTCGAAGCTGATTTGGGCGAAGCGTGCCCCGCGTACCGCCGCGGCGTT GCTGGTGGGTGCCGCGTTGGCGGTGTCGGGTGTGCTCATGCAGGCGTTGAGCCGTAACCCGCTGGCTGAGCCGGGTCTGC TGGGTGTGAACTCGGGTGCTGCCGCCTCCGTGGTGGTCGGTGTGGGCGTTTTTGGGGTGTCGTCCCCGTTCGTTCAGCTC TGGCTGGCGCTGGCCGGTTCGGGTCTGGCGGCGGCGCTGGTGTTCGTCATGGGCCTGGTGGATTCTAAACCGAACCTGGA TTCGACGGCGCGTCTGGTGCTGACGGGTGTGGCGGTGAATGCCTGCCTGGGCACGATTACCGGCATTATCACGATGTTTA ATTCGAAGGCTTTTGATTCGCACCGTTTCTGGGTGGTGGGTTCGCTGGAGAACCGCACCTTTGAGCAGGTGCTGTCTGCG CTGCCCTTTGTTGCGTTGGGTTTGGTGCTGTCGTTCATGCTGATCGGTCCTCTGCGTGCCCTGGCACTCGGTGAGGATGC GGCAGCCGGCTTGGGCGTGCCGGTGACGATGGTGCGTGGCGCGACGATTATTGCGATTATGGCGCTGTGCGGTGCAGCGA CTGCGGTTGCGGGCCCGATTGGTTTTGTGGGTCTGGTCGTGCCGCATGTGGTGCGTCTGCTGGTGGGTTCCGACATTGCG CGCGTGCTGCCGCTGTCGCTGGTGTACGGCCCGGTGTTGGTACTTGCCTCCGATATTCTGGGTCGCGTTCTGGTGATGCC GAGTGAGCTTGAGGTGGGTATTGTGACCGCCTTTATTGGTGCCCCGGTGCTGATGGTTCTGGTGCTGCGTTTGAGCACCG GTGCGCGCGGTGCGAAGAAGGGCCGCATGGGTTCGAAGGCGCAGGCGCACGATGAGTCGGGTCCGGCTCACGTGTCGGAG CACGGTCCGCATCGTGCTCAGCGCCCTGTTGCGCGTGGTTCGTCTGGTTCGACTGGCGTATCTGGTTTGTAG Protein sequence : MTPQTSPSSGPAVSAASLAKIRALSASSDAVSGASSGGQGGKSISRLAVALIIGGVLLVLLCALSFTVGSRLFTLDRSID GFLHPEANTIESKLIWAKRAPRTAAALLVGAALAVSGVLMQALSRNPLAEPGLLGVNSGAAASVVVGVGVFGVSSPFVQL WLALAGSGLAAALVFVMGLVDSKPNLDSTARLVLTGVAVNACLGTITGIITMFNSKAFDSHRFWVVGSLENRTFEQVLSA LPFVALGLVLSFMLIGPLRALALGEDAAAGLGVPVTMVRGATIIAIMALCGAATAVAGPIGFVGLVVPHVVRLLVGSDIA RVLPLSLVYGPVLVLASDILGRVLVMPSELEVGIVTAFIGAPVLMVLVLRLSTGARGAKKGRMGSKAQAHDESGPAHVSE HGPHRAQRPVARGSSGSTGVSGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-22 | 42 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 1e-22 | 42 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 1e-22 | 42 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-22 | 42 |
