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Name : RMDY18_01380 (RMDY18_01380) Accession : YP_003361790.1 Strain : Rothia mucilaginosa DY-18 Genome accession: NC_013715 Putative virulence/resistance : Virulence Product : Mn2+/Zn2+ ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 145600 - 146484 bp Length : 885 bp Strand : + Note : - DNA sequence : ATGGACATCCTCAACTTTCTGGTGGAGCCGCTGACCCTGCCCTTCATGCTCCGCGCATTCGTGGTCACCGTCATCGCCGC CGCCGTCTGCGCCCTGCTCTCTTGCTGGCTCGTGCTGCTCGGCTGGTCGCTCATGGGCGACGCGATCTCGCACGCGGTGC TGCCCGGCGTGGTGCTCGCCTACATTTTCGGTGCACCCTTCGCGGTGGGTGCGGTCATTGCCGCGCTCCTGGCAGTGGCG CTCATCGGCGGGGTGCGGCGCAGCGGCCGCGTGCGCGAAGACGCCGCGATCGGCATCGTGTTCACGACCATGTTCGCGTT CGGTCTGGTGCTGATTTCGGTCACGCCGTCGAATACGGACCTGAACCATATTCTCTTCGGTAACGTGCTGGGCGTGTCCT GGTCGGACGTCTGGCAGGTCGCTATCCTCGCGGTGGTGGTTGCCGCCGTGCTGCTGGTCAAGCGCCGCGACTTCGTACTG TACGCCTTCGACCCGGGCTTCGCGCAGGCGGTGGGGCTGCGTCCGCGTCTGCTCGGCGCGCTGCTACTCATTATGCTGGC GCTGACCTCCGTGGTGGCGCTGCAGATCGTGGGCGTGGTGCTGGTCGTGGCGATGCTTGTCATCCCCGGCTCCACCGCAC GCCTCATTACCGACCGGTTCGTGCCGATGCTCGCGGTGAGCGTGGGAGTCTCCCTGCTGGGCACGCTGACCGGCCTGTAC GCCAGCTACCACGCGGATGTATCCCCCGGTGGTGCCGTGGTCGTCACGCAGGGCATACTGTTCGCCCTGGCGTACGTGTT TGCCCCGCGCTACGGTCTGCTGGGCAGGATGCGTGCCCGCCGACTCAGCACTGCTGCAACGAAAACTGAGCCCTCAGCTT CCTAA Protein sequence : MDILNFLVEPLTLPFMLRAFVVTVIAAAVCALLSCWLVLLGWSLMGDAISHAVLPGVVLAYIFGAPFAVGAVIAALLAVA LIGGVRRSGRVREDAAIGIVFTTMFAFGLVLISVTPSNTDLNHILFGNVLGVSWSDVWQVAILAVVVAAVLLVKRRDFVL YAFDPGFAQAVGLRPRLLGALLLIMLALTSVVALQIVGVVLVVAMLVIPGSTARLITDRFVPMLAVSVGVSLLGTLTGLY ASYHADVSPGGAVVVTQGILFALAYVFAPRYGLLGRMRARRLSTAATKTEPSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 5e-28 | 46 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 4e-28 | 46 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 8e-28 | 45 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 8e-28 | 45 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 7e-28 | 45 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 4e-27 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 5e-27 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 5e-27 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-27 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | BAC0352 | Protein | 2e-28 | 46 |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | BAC0442 | Protein | 1e-34 | 43 |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | BAC0441 | Protein | 1e-26 | 42 |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | BAC0351 | Protein | 2e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | VFG0528 | Protein | 2e-28 | 46 |
| RMDY18_01380 | YP_003361790.1 | Mn2+/Zn2+ ABC transporter permease | VFG0527 | Protein | 2e-27 | 41 |
