Gene Information

Name : RMDY18_01370 (RMDY18_01370)
Accession : YP_003361789.1
Strain : Rothia mucilaginosa DY-18
Genome accession: NC_013715
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 144796 - 145599 bp
Length : 804 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCACTCTTCTCAGCTGCGAAAATGTGCACGTGAACTACGGGCCAGTCCGCGCCCTCACCGGCGCATCCTTCACCCT
GGACACCGGGCGTATCTGCGGCCTGATCGGTATGAACGGTTCCGGCAAATCCACCCTCTTCAAAGCCATCATGGGGGTCG
TGCCCATGCACGCCGGCAGCATCACCCTCGACGGGCAGCCCGTCGGCGGTAACCGCGGCAAGAGCGCGCACCACCACCGC
GCCGGACTCGTTAGCTACGTGCCGCAGAGCGAAGAAATCGACTGGACCTTCCCCATCTCCGTGCGTGAGGTTGTCAGCAT
GGGACGCTACCGCAACCTCGGCATCACCCGCCGCCTGCGTGCCGCGGACCGTGCCGCCGTGGATGAGGCGCTCGCCCGCG
TGGAACTGACCGACCTTGCCGACCGTCAGATTGGGGCGCTCTCGGGCGGTCAGCGTAAGCGCGCCTTCGTGGCACGCGCT
ATCGCCCAGGGTGCCCAGCTGCTGCTGCTGGATGAGCCCTTCGCCGGCGTGGACAAGCGCAGCGAGGCGATGCTCATGCA
GGTCATCAAACAGCTGCGCGACGAGGGCGCAACCGTGCTGGTTTCCACGCACGACTTGGCGACCCTGCGCCAGTTCGCCG
ACGAGGCGCTACTGCTGCGCGGCGAGATTCTGATGCACGACACCCCCGAGAAGGTGCTCGCCCCCGAGAACCTGGTGCGT
GCCTTCGGCATGGAGGTGGACGCCGGCGCGCCGGTCGCTGCTACCGGCACTACTGCAAACAGCTCTGCGGAAGGGAAGAA
CTAA

Protein sequence : 
MSTLLSCENVHVNYGPVRALTGASFTLDTGRICGLIGMNGSGKSTLFKAIMGVVPMHAGSITLDGQPVGGNRGKSAHHHR
AGLVSYVPQSEEIDWTFPISVREVVSMGRYRNLGITRRLRAADRAAVDEALARVELTDLADRQIGALSGGQRKRAFVARA
IAQGAQLLLLDEPFAGVDKRSEAMLMQVIKQLRDEGATVLVSTHDLATLRQFADEALLLRGEILMHDTPEKVLAPENLVR
AFGMEVDAGAPVAATGTTANSSAEGKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-43 48
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-44 48
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-43 48
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-43 48
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-43 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMDY18_01370 YP_003361789.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 5e-44 48
RMDY18_01370 YP_003361789.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RMDY18_01370 YP_003361789.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 4e-44 48