Gene Information

Name : BDP_0904 (BDP_0904)
Accession : YP_003360382.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1031886 - 1033328 bp
Length : 1443 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTAAAGCCAAGATCGTAGATACCATCGGTCCCGCTACCGAGTCTCTGGAAGGCATCACCAGCCTCGTCGAAGCAGG
TATGGACGTTGCTCGTCTGAACCGCTCCCATGGCACTCCTGAAGACCACCTGAAGGTCTACAACAACCTTCGTGCAGCCG
CCAAGGCCACCGGTCGCAATGTTGCCGCACTGGTCGATCTGCAGGGCCCGAAGATTCGTTGCGGTTGGTTCAAGAAGAAC
GCCGAAGGCGAAGACAAGGTTCAGCTGACCGAAGGCCAGGAGTTCGTCATCACCACCGATGACATCGAAGGCGACGAGCA
CATCACCTCCACCACCTTCAAGGGTCTGCCGGGCGATTGCCACGCCGGCGATCCGATTCTGATCGATGACGGCAAGGTCC
GTCTCGAGGTCACCAAGGTCGAGGGCAACAACGTGTACACCAAGGTCGTTGTGGCCGGACCGGTTTCCAGCCACAAGGGC
ATCAATCTGCCGGGTGTCGCCGTGTCTCTGCCGGCACTGACCGAAAAGGATGAGGCCGATCTGCGTTGGGCCATCCAGAC
CGGTGCCGACATCATCGCCATGTCCTTCGTGCGTTTCGCCACCGACATCGATCGTGCCCATGAGATCATGGACGAGGAAG
GACGCCGCATTCCGGTCGTCGCCAAGATCGAAAAGCCGCAGGCTCTTGAGAACCTCGAAGAGATCGTCAAGGCTTTCGAC
GGCATCATGGTCGCCCGTGGTGACATGGCCGTCGAGTGCCCGCTCGAAGAGGTCCCGCTGGCTACCAAGCGTTGCATCGA
GCTCGCACGCCAGTATGCCAAGCCGGTCATCGTGGCCACCGAGGTCCTCGGCTCCATGGTCAACTCCCCGGTCCCGACCC
GTGCAGAGGCCTCCGACTGCGCCAACGCCATTCTGGACGGCGCCGACGCCACCATGACCTCCAACGAGACCGCCGTCGGC
AAGTATCCGGCGGTCACCGTGAACACCATGAGCCGTATTTCCTCCTTCGCCACCGAACACGGTTTCGACCGTATCCCGGA
GCTGAAGAACCTGGACATGTCCTCCACCGGCGCAGTGTCCTCCGCTGCCGTCGATCTGGCCGACAAGCTCAACGCCAAGG
CCATTGTCGCCTACACCCAGACCGGTTCCACCGTGCATCGCGTCTCCCGCGAGCGTCCGGCCACCCCGATCTACGGCATC
ACCAACAACGAGCACACCTATCACTGGCTGGCCCTGTCCTGGGGCACTGAGTCCTTCCTGCTCGATGAGGATTACCATGA
CAAGTCCCGCAAGGACCTGATGATCTTCACCGACAAGATCCTCAAGGATGCCGGCAAGGTCGTCGATGGCGACAAGATCG
TCGTGCTGAGCTCCGCTCAGGGCGAGCACCAGCCGGGCCGTACCGACTCCATCTACGTCCACACCGTCGGTGCCTGCGAC
TGA

Protein sequence : 
MRKAKIVDTIGPATESLEGITSLVEAGMDVARLNRSHGTPEDHLKVYNNLRAAAKATGRNVAALVDLQGPKIRCGWFKKN
AEGEDKVQLTEGQEFVITTDDIEGDEHITSTTFKGLPGDCHAGDPILIDDGKVRLEVTKVEGNNVYTKVVVAGPVSSHKG
INLPGVAVSLPALTEKDEADLRWAIQTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPVVAKIEKPQALENLEEIVKAFD
GIMVARGDMAVECPLEEVPLATKRCIELARQYAKPVIVATEVLGSMVNSPVPTRAEASDCANAILDGADATMTSNETAVG
KYPAVTVNTMSRISSFATEHGFDRIPELKNLDMSSTGAVSSAAVDLADKLNAKAIVAYTQTGSTVHRVSRERPATPIYGI
TNNEHTYHWLALSWGTESFLLDEDYHDKSRKDLMIFTDKILKDAGKVVDGDKIVVLSSAQGEHQPGRTDSIYVHTVGACD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-63 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-63 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-63 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDP_0904 YP_003360382.1 pyruvate kinase VFG0479 Protein 4e-64 44