Gene Information

Name : BDP_0775 (BDP_0775)
Accession : YP_003360260.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 3.1.1.61
Position : 888625 - 889371 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
GTGAAGCTTGAAGGCATGAGTAAGCCTATTGAAGCATCAATTGTCGTTGTCGATGACGAACCATCCATTCGCGAGTTGCT
GGTGGCCTCGCTGCATTTCGCGGGATTCGAGGTGAATACCGCGGCCTCCGGTTCCGAGGCCATCGAGGTCATCGAAAAAA
CGCAACCCGATTTGATCGTGCTGGATGTGATGCTTCCGGATATCGATGGTTTCACGGTGACCCGACGCATTCGTCAGGAA
GGCATCGCCACACCGGTGCTGTATTTGACGGCACGCGATGACACCCAAGACAAGGTCATGGGCCTGACCGTCGGCGGCGA
CGATTACGTGACCAAACCTTTCAGCCTGGAGGAAGTGGTGGCGCGCATCCGCGCCATTCTGCGCCGTACCCAGGAACAGG
TGGAGGACGATCCGATCATCCGGGTCGGCGATCTGGAGATCAACGAGGATTCGCATGACGTATCCCGTGCCGGCCAGCCG
ATCGATCTGAGCCCCACCGAATACAAACTGCTCCGTTACCTGATGGACAACGAAGGCAGGGTGCTTTCCAAGGCGCAGAT
TCTTGACCATGTGTGGCAGTACGACTGGGGCGGCGACGCAGCAATCGTGGAATCCTACATCTCCTATCTACGTAAGAAGG
TCGACGGCATCGTGGTCGAGGACGCCGACGGCGAAGAGCATAAGGTGACCCCGCTCATCGAAACCAAACGTGGCATCGGC
TACATGATTCGCGCACCCAAGAACTGA

Protein sequence : 
MKLEGMSKPIEASIVVVDDEPSIRELLVASLHFAGFEVNTAASGSEAIEVIEKTQPDLIVLDVMLPDIDGFTVTRRIRQE
GIATPVLYLTARDDTQDKVMGLTVGGDDYVTKPFSLEEVVARIRAILRRTQEQVEDDPIIRVGDLEINEDSHDVSRAGQP
IDLSPTEYKLLRYLMDNEGRVLSKAQILDHVWQYDWGGDAAIVESYISYLRKKVDGIVVEDADGEEHKVTPLIETKRGIG
YMIRAPKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 3e-27 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 3e-27 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 3e-27 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDP_0775 YP_003360260.1 two-component response regulator NC_002952.2859905.p0 Protein 7e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_002951.3237708.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_003923.1003749.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_002758.1121668.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_007622.3794472.p0 Protein 6e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_009641.5332272.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_013450.8614421.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_007793.3914279.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_002745.1124361.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator NC_009782.5559369.p0 Protein 8e-45 44
BDP_0775 YP_003360260.1 two-component response regulator HE999704.1.gene2815. Protein 1e-42 44
BDP_0775 YP_003360260.1 two-component response regulator BAC0197 Protein 1e-36 42
BDP_0775 YP_003360260.1 two-component response regulator AE016830.1.gene1681. Protein 2e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDP_0775 YP_003360260.1 two-component response regulator VFG1386 Protein 9e-63 54
BDP_0775 YP_003360260.1 two-component response regulator VFG1390 Protein 1e-46 44